Gene : Cucsa.323180 C. sativus v1.0

Defline:  (1 of 2) PTHR10073:SF7 - DNA MISMATCH REPAIR PROTEIN MLH3-RELATED Genomic Order:  304
Name:  ? Cucsa.323180 Secondary Identifier:  ? PAC:16977908

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.323180 0.5kb upstream 0.5kb upstream 984 true scaffold03080: 2659567-2660550 Cucumis sativus
Cucsa.323180 0.5kb upstream 0.5kb upstream 500 false scaffold03080: 2660051-2660550 Cucumis sativus
Cucsa.323180 0.5kb downstream 0.5kb downstream 984 true scaffold03080: 2659067-2660050 Cucumis sativus
Cucsa.323180 0.5kb downstream 0.5kb downstream 500 false scaffold03080: 2659067-2659566 Cucumis sativus
Cucsa.323180 1.0kb upstream 1.0kb upstream 1484 true scaffold03080: 2659567-2661050 Cucumis sativus
Cucsa.323180 1.0kb upstream 1.0kb upstream 1000 false scaffold03080: 2660051-2661050 Cucumis sativus
Cucsa.323180 1.0kb downstream 1.0kb downstream 1484 true scaffold03080: 2658567-2660050 Cucumis sativus
Cucsa.323180 1.0kb downstream 1.0kb downstream 1000 false scaffold03080: 2658567-2659566 Cucumis sativus
Cucsa.323180 2.0kb upstream 2.0kb upstream 2484 true scaffold03080: 2659567-2662050 Cucumis sativus
Cucsa.323180 2.0kb upstream 2.0kb upstream 2000 false scaffold03080: 2660051-2662050 Cucumis sativus
Cucsa.323180 2.0kb downstream 2.0kb downstream 2484 true scaffold03080: 2657567-2660050 Cucumis sativus
Cucsa.323180 2.0kb downstream 2.0kb downstream 2000 false scaffold03080: 2657567-2659566 Cucumis sativus
Cucsa.323180 5.0kb upstream 5.0kb upstream 5484 true scaffold03080: 2659567-2665050 Cucumis sativus
Cucsa.323180 5.0kb upstream 5.0kb upstream 5000 false scaffold03080: 2660051-2665050 Cucumis sativus
Cucsa.323180 5.0kb downstream 5.0kb downstream 5484 true scaffold03080: 2654567-2660050 Cucumis sativus
Cucsa.323180 5.0kb downstream 5.0kb downstream 5000 false scaffold03080: 2654567-2659566 Cucumis sativus
Cucsa.323180 10.0kb upstream 10.0kb upstream 10484 true scaffold03080: 2659567-2670050 Cucumis sativus
Cucsa.323180 10.0kb upstream 10.0kb upstream 10000 false scaffold03080: 2660051-2670050 Cucumis sativus
Cucsa.323180 10.0kb downstream 10.0kb downstream 10484 true scaffold03080: 2649567-2660050 Cucumis sativus
Cucsa.323180 10.0kb downstream 10.0kb downstream 10000 false scaffold03080: 2649567-2659566 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121605439 5273 Angiosperm Singleton cluster - no MSA
122235704 5265 Fabidae Singleton cluster - no MSA
123981918 5270 Rosid Singleton cluster - no MSA
123557593 5271 Pentapetalae Singleton cluster - no MSA
122592407 5272 Eudicot Singleton cluster - no MSA
120877729 5274 Embryophyte Singleton cluster - no MSA
122918618 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain