Gene : Cucsa.339020 C. sativus v1.0

Defline:  (1 of 1) PTHR10091:SF10 - ALDOSE 1-EPIMERASE-RELATED Genomic Order:  220
Name:  ? Cucsa.339020 Secondary Identifier:  ? PAC:16978822

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-6317 Cucumis sativus pathologic  
Csativus PWY66-422 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.339020 0.5kb upstream 0.5kb upstream 3545 true scaffold03356: 1765455-1768999 Cucumis sativus
Cucsa.339020 0.5kb upstream 0.5kb upstream 500 false scaffold03356: 1768500-1768999 Cucumis sativus
Cucsa.339020 0.5kb downstream 0.5kb downstream 3545 true scaffold03356: 1764955-1768499 Cucumis sativus
Cucsa.339020 0.5kb downstream 0.5kb downstream 500 false scaffold03356: 1764955-1765454 Cucumis sativus
Cucsa.339020 1.0kb upstream 1.0kb upstream 4045 true scaffold03356: 1765455-1769499 Cucumis sativus
Cucsa.339020 1.0kb upstream 1.0kb upstream 1000 false scaffold03356: 1768500-1769499 Cucumis sativus
Cucsa.339020 1.0kb downstream 1.0kb downstream 4045 true scaffold03356: 1764455-1768499 Cucumis sativus
Cucsa.339020 1.0kb downstream 1.0kb downstream 1000 false scaffold03356: 1764455-1765454 Cucumis sativus
Cucsa.339020 2.0kb upstream 2.0kb upstream 5045 true scaffold03356: 1765455-1770499 Cucumis sativus
Cucsa.339020 2.0kb upstream 2.0kb upstream 2000 false scaffold03356: 1768500-1770499 Cucumis sativus
Cucsa.339020 2.0kb downstream 2.0kb downstream 5045 true scaffold03356: 1763455-1768499 Cucumis sativus
Cucsa.339020 2.0kb downstream 2.0kb downstream 2000 false scaffold03356: 1763455-1765454 Cucumis sativus
Cucsa.339020 5.0kb upstream 5.0kb upstream 8045 true scaffold03356: 1765455-1773499 Cucumis sativus
Cucsa.339020 5.0kb upstream 5.0kb upstream 5000 false scaffold03356: 1768500-1773499 Cucumis sativus
Cucsa.339020 5.0kb downstream 5.0kb downstream 8045 true scaffold03356: 1760455-1768499 Cucumis sativus
Cucsa.339020 5.0kb downstream 5.0kb downstream 5000 false scaffold03356: 1760455-1765454 Cucumis sativus
Cucsa.339020 10.0kb upstream 10.0kb upstream 13045 true scaffold03356: 1765455-1778499 Cucumis sativus
Cucsa.339020 10.0kb upstream 10.0kb upstream 10000 false scaffold03356: 1768500-1778499 Cucumis sativus
Cucsa.339020 10.0kb downstream 10.0kb downstream 13045 true scaffold03356: 1755455-1768499 Cucumis sativus
Cucsa.339020 10.0kb downstream 10.0kb downstream 10000 false scaffold03356: 1755455-1765454 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308649 5265 Fabidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain