Gene : Cucsa.319380 C. sativus v1.0
Defline:  (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  8
Name:  ? Cucsa.319380 Secondary Identifier:  ? PAC:16977235
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.319380 0.5kb upstream 0.5kb upstream 2615 true scaffold03078: 68491-71105 Cucumis sativus
Cucsa.319380 0.5kb upstream 0.5kb upstream 500 false scaffold03078: 70606-71105 Cucumis sativus
Cucsa.319380 0.5kb downstream 0.5kb downstream 2615 true scaffold03078: 67991-70605 Cucumis sativus
Cucsa.319380 0.5kb downstream 0.5kb downstream 500 false scaffold03078: 67991-68490 Cucumis sativus
Cucsa.319380 1.0kb upstream 1.0kb upstream 3115 true scaffold03078: 68491-71605 Cucumis sativus
Cucsa.319380 1.0kb upstream 1.0kb upstream 1000 false scaffold03078: 70606-71605 Cucumis sativus
Cucsa.319380 1.0kb downstream 1.0kb downstream 3115 true scaffold03078: 67491-70605 Cucumis sativus
Cucsa.319380 1.0kb downstream 1.0kb downstream 1000 false scaffold03078: 67491-68490 Cucumis sativus
Cucsa.319380 2.0kb upstream 2.0kb upstream 4115 true scaffold03078: 68491-72605 Cucumis sativus
Cucsa.319380 2.0kb upstream 2.0kb upstream 2000 false scaffold03078: 70606-72605 Cucumis sativus
Cucsa.319380 2.0kb downstream 2.0kb downstream 4115 true scaffold03078: 66491-70605 Cucumis sativus
Cucsa.319380 2.0kb downstream 2.0kb downstream 2000 false scaffold03078: 66491-68490 Cucumis sativus
Cucsa.319380 5.0kb upstream 5.0kb upstream 7115 true scaffold03078: 68491-75605 Cucumis sativus
Cucsa.319380 5.0kb upstream 5.0kb upstream 5000 false scaffold03078: 70606-75605 Cucumis sativus
Cucsa.319380 5.0kb downstream 5.0kb downstream 7115 true scaffold03078: 63491-70605 Cucumis sativus
Cucsa.319380 5.0kb downstream 5.0kb downstream 5000 false scaffold03078: 63491-68490 Cucumis sativus
Cucsa.319380 10.0kb upstream 10.0kb upstream 12115 true scaffold03078: 68491-80605 Cucumis sativus
Cucsa.319380 10.0kb upstream 10.0kb upstream 10000 false scaffold03078: 70606-80605 Cucumis sativus
Cucsa.319380 10.0kb downstream 10.0kb downstream 12115 true scaffold03078: 58491-70605 Cucumis sativus
Cucsa.319380 10.0kb downstream 10.0kb downstream 10000 false scaffold03078: 58491-68490 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307922 5265 Fabidae View MSA
124064149 5270 Rosid View MSA
123753301 5271 Pentapetalae View MSA
122789942 5272 Eudicot View MSA
122043539 5273 Angiosperm View MSA
121344903 5274 Embryophyte View MSA
123380125 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain