Gene : Cucsa.316830 C. sativus v1.0
Defline:  (1 of 9) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  5
Name:  ? Cucsa.316830 Secondary Identifier:  ? PAC:16977123
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.316830 0.5kb upstream 0.5kb upstream 3790 true scaffold03050: 61620-65409 Cucumis sativus
Cucsa.316830 0.5kb upstream 0.5kb upstream 500 false scaffold03050: 61620-62119 Cucumis sativus
Cucsa.316830 0.5kb downstream 0.5kb downstream 3790 true scaffold03050: 62120-65909 Cucumis sativus
Cucsa.316830 0.5kb downstream 0.5kb downstream 500 false scaffold03050: 65410-65909 Cucumis sativus
Cucsa.316830 1.0kb upstream 1.0kb upstream 4290 true scaffold03050: 61120-65409 Cucumis sativus
Cucsa.316830 1.0kb upstream 1.0kb upstream 1000 false scaffold03050: 61120-62119 Cucumis sativus
Cucsa.316830 1.0kb downstream 1.0kb downstream 4290 true scaffold03050: 62120-66409 Cucumis sativus
Cucsa.316830 1.0kb downstream 1.0kb downstream 1000 false scaffold03050: 65410-66409 Cucumis sativus
Cucsa.316830 2.0kb upstream 2.0kb upstream 5290 true scaffold03050: 60120-65409 Cucumis sativus
Cucsa.316830 2.0kb upstream 2.0kb upstream 2000 false scaffold03050: 60120-62119 Cucumis sativus
Cucsa.316830 2.0kb downstream 2.0kb downstream 5290 true scaffold03050: 62120-67409 Cucumis sativus
Cucsa.316830 2.0kb downstream 2.0kb downstream 2000 false scaffold03050: 65410-67409 Cucumis sativus
Cucsa.316830 5.0kb upstream 5.0kb upstream 8290 true scaffold03050: 57120-65409 Cucumis sativus
Cucsa.316830 5.0kb upstream 5.0kb upstream 5000 false scaffold03050: 57120-62119 Cucumis sativus
Cucsa.316830 5.0kb downstream 5.0kb downstream 8290 true scaffold03050: 62120-70409 Cucumis sativus
Cucsa.316830 5.0kb downstream 5.0kb downstream 5000 false scaffold03050: 65410-70409 Cucumis sativus
Cucsa.316830 10.0kb upstream 10.0kb upstream 13290 true scaffold03050: 52120-65409 Cucumis sativus
Cucsa.316830 10.0kb upstream 10.0kb upstream 10000 false scaffold03050: 52120-62119 Cucumis sativus
Cucsa.316830 10.0kb downstream 10.0kb downstream 13290 true scaffold03050: 62120-75409 Cucumis sativus
Cucsa.316830 10.0kb downstream 10.0kb downstream 10000 false scaffold03050: 65410-75409 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305568 5265 Fabidae View MSA
124068377 5270 Rosid View MSA
123740904 5271 Pentapetalae View MSA
122792005 5272 Eudicot View MSA
122042457 5273 Angiosperm View MSA
121344277 5274 Embryophyte View MSA
123380015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain