Gene : Cucsa.353100 C. sativus v1.0
Defline:  (1 of 2) 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase Genomic Order:  104
Name:  ? Cucsa.353100 Secondary Identifier:  ? PAC:16980110
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-2541 Cucumis sativus pathologic  
Csativus PWY-5670 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.353100 0.5kb upstream 0.5kb upstream 6666 true scaffold03533: 724841-731506 Cucumis sativus
Cucsa.353100 0.5kb upstream 0.5kb upstream 500 false scaffold03533: 724841-725340 Cucumis sativus
Cucsa.353100 0.5kb downstream 0.5kb downstream 6666 true scaffold03533: 725341-732006 Cucumis sativus
Cucsa.353100 0.5kb downstream 0.5kb downstream 500 false scaffold03533: 731507-732006 Cucumis sativus
Cucsa.353100 1.0kb upstream 1.0kb upstream 7166 true scaffold03533: 724341-731506 Cucumis sativus
Cucsa.353100 1.0kb upstream 1.0kb upstream 1000 false scaffold03533: 724341-725340 Cucumis sativus
Cucsa.353100 1.0kb downstream 1.0kb downstream 7166 true scaffold03533: 725341-732506 Cucumis sativus
Cucsa.353100 1.0kb downstream 1.0kb downstream 1000 false scaffold03533: 731507-732506 Cucumis sativus
Cucsa.353100 2.0kb upstream 2.0kb upstream 8166 true scaffold03533: 723341-731506 Cucumis sativus
Cucsa.353100 2.0kb upstream 2.0kb upstream 2000 false scaffold03533: 723341-725340 Cucumis sativus
Cucsa.353100 2.0kb downstream 2.0kb downstream 8166 true scaffold03533: 725341-733506 Cucumis sativus
Cucsa.353100 2.0kb downstream 2.0kb downstream 2000 false scaffold03533: 731507-733506 Cucumis sativus
Cucsa.353100 5.0kb upstream 5.0kb upstream 11166 true scaffold03533: 720341-731506 Cucumis sativus
Cucsa.353100 5.0kb upstream 5.0kb upstream 5000 false scaffold03533: 720341-725340 Cucumis sativus
Cucsa.353100 5.0kb downstream 5.0kb downstream 11166 true scaffold03533: 725341-736506 Cucumis sativus
Cucsa.353100 5.0kb downstream 5.0kb downstream 5000 false scaffold03533: 731507-736506 Cucumis sativus
Cucsa.353100 10.0kb upstream 10.0kb upstream 16166 true scaffold03533: 715341-731506 Cucumis sativus
Cucsa.353100 10.0kb upstream 10.0kb upstream 10000 false scaffold03533: 715341-725340 Cucumis sativus
Cucsa.353100 10.0kb downstream 10.0kb downstream 16166 true scaffold03533: 725341-741506 Cucumis sativus
Cucsa.353100 10.0kb downstream 10.0kb downstream 10000 false scaffold03533: 731507-741506 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306242 5265 Fabidae View MSA
124072398 5270 Rosid View MSA
123747368 5271 Pentapetalae View MSA
122788930 5272 Eudicot View MSA
122042003 5273 Angiosperm View MSA
121344187 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain