Gene : Cucsa.396940 C. sativus v1.0
Defline:  (1 of 3) PTHR11439//PTHR11439:SF172 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  1
Name:  ? Cucsa.396940 Secondary Identifier:  ? PAC:16983478
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.396940 0.5kb upstream 0.5kb upstream 1090 true scaffold04133: 1-1090 Cucumis sativus
Cucsa.396940 0.5kb upstream 0.5kb upstream 68 false scaffold04133: 1-68 Cucumis sativus
Cucsa.396940 0.5kb downstream 0.5kb downstream 1030 true scaffold04133: 69-1098 Cucumis sativus
Cucsa.396940 0.5kb downstream 0.5kb downstream 8 false scaffold04133: 1091-1098 Cucumis sativus
Cucsa.396940 1.0kb upstream 1.0kb upstream 1090 true scaffold04133: 1-1090 Cucumis sativus
Cucsa.396940 1.0kb upstream 1.0kb upstream 68 false scaffold04133: 1-68 Cucumis sativus
Cucsa.396940 1.0kb downstream 1.0kb downstream 1030 true scaffold04133: 69-1098 Cucumis sativus
Cucsa.396940 1.0kb downstream 1.0kb downstream 8 false scaffold04133: 1091-1098 Cucumis sativus
Cucsa.396940 2.0kb upstream 2.0kb upstream 1090 true scaffold04133: 1-1090 Cucumis sativus
Cucsa.396940 2.0kb upstream 2.0kb upstream 68 false scaffold04133: 1-68 Cucumis sativus
Cucsa.396940 2.0kb downstream 2.0kb downstream 1030 true scaffold04133: 69-1098 Cucumis sativus
Cucsa.396940 2.0kb downstream 2.0kb downstream 8 false scaffold04133: 1091-1098 Cucumis sativus
Cucsa.396940 5.0kb upstream 5.0kb upstream 1090 true scaffold04133: 1-1090 Cucumis sativus
Cucsa.396940 5.0kb upstream 5.0kb upstream 68 false scaffold04133: 1-68 Cucumis sativus
Cucsa.396940 5.0kb downstream 5.0kb downstream 1030 true scaffold04133: 69-1098 Cucumis sativus
Cucsa.396940 5.0kb downstream 5.0kb downstream 8 false scaffold04133: 1091-1098 Cucumis sativus
Cucsa.396940 10.0kb upstream 10.0kb upstream 1090 true scaffold04133: 1-1090 Cucumis sativus
Cucsa.396940 10.0kb upstream 10.0kb upstream 68 false scaffold04133: 1-68 Cucumis sativus
Cucsa.396940 10.0kb downstream 10.0kb downstream 1030 true scaffold04133: 69-1098 Cucumis sativus
Cucsa.396940 10.0kb downstream 10.0kb downstream 8 false scaffold04133: 1091-1098 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237457 5265 Fabidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain