Gene : Cucsa.379830 C. sativus v1.0
Defline:  (1 of 3) PF12776//PF13359 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_3) // DDE superfamily endonuclease (DDE_Tnp_4) Genomic Order:  23
Name:  ? Cucsa.379830 Secondary Identifier:  ? PAC:16982170
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.379830 0.5kb upstream 0.5kb upstream 2855 true scaffold03837: 228696-231550 Cucumis sativus
Cucsa.379830 0.5kb upstream 0.5kb upstream 500 false scaffold03837: 228696-229195 Cucumis sativus
Cucsa.379830 0.5kb downstream 0.5kb downstream 2855 true scaffold03837: 229196-232050 Cucumis sativus
Cucsa.379830 0.5kb downstream 0.5kb downstream 500 false scaffold03837: 231551-232050 Cucumis sativus
Cucsa.379830 1.0kb upstream 1.0kb upstream 3355 true scaffold03837: 228196-231550 Cucumis sativus
Cucsa.379830 1.0kb upstream 1.0kb upstream 1000 false scaffold03837: 228196-229195 Cucumis sativus
Cucsa.379830 1.0kb downstream 1.0kb downstream 3355 true scaffold03837: 229196-232550 Cucumis sativus
Cucsa.379830 1.0kb downstream 1.0kb downstream 1000 false scaffold03837: 231551-232550 Cucumis sativus
Cucsa.379830 2.0kb upstream 2.0kb upstream 4355 true scaffold03837: 227196-231550 Cucumis sativus
Cucsa.379830 2.0kb upstream 2.0kb upstream 2000 false scaffold03837: 227196-229195 Cucumis sativus
Cucsa.379830 2.0kb downstream 2.0kb downstream 4355 true scaffold03837: 229196-233550 Cucumis sativus
Cucsa.379830 2.0kb downstream 2.0kb downstream 2000 false scaffold03837: 231551-233550 Cucumis sativus
Cucsa.379830 5.0kb upstream 5.0kb upstream 7355 true scaffold03837: 224196-231550 Cucumis sativus
Cucsa.379830 5.0kb upstream 5.0kb upstream 5000 false scaffold03837: 224196-229195 Cucumis sativus
Cucsa.379830 5.0kb downstream 5.0kb downstream 7355 true scaffold03837: 229196-236550 Cucumis sativus
Cucsa.379830 5.0kb downstream 5.0kb downstream 5000 false scaffold03837: 231551-236550 Cucumis sativus
Cucsa.379830 10.0kb upstream 10.0kb upstream 12355 true scaffold03837: 219196-231550 Cucumis sativus
Cucsa.379830 10.0kb upstream 10.0kb upstream 10000 false scaffold03837: 219196-229195 Cucumis sativus
Cucsa.379830 10.0kb downstream 10.0kb downstream 12355 true scaffold03837: 229196-241550 Cucumis sativus
Cucsa.379830 10.0kb downstream 10.0kb downstream 10000 false scaffold03837: 231551-241550 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315283 5265 Fabidae View MSA
124066103 5270 Rosid View MSA
123753432 5271 Pentapetalae View MSA
122797499 5272 Eudicot View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain