Gene : Cucsa.048820 C. sativus v1.0
Defline:  (1 of 1) PTHR12965 - VACUOLAR PROTEIN SORTING 54 Genomic Order:  577
Name:  ? Cucsa.048820 Secondary Identifier:  ? PAC:16953932
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.048820 0.5kb upstream 0.5kb upstream 13449 true scaffold00542: 3442037-3455485 Cucumis sativus
Cucsa.048820 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 3454986-3455485 Cucumis sativus
Cucsa.048820 0.5kb downstream 0.5kb downstream 13449 true scaffold00542: 3441537-3454985 Cucumis sativus
Cucsa.048820 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 3441537-3442036 Cucumis sativus
Cucsa.048820 1.0kb upstream 1.0kb upstream 13949 true scaffold00542: 3442037-3455985 Cucumis sativus
Cucsa.048820 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 3454986-3455985 Cucumis sativus
Cucsa.048820 1.0kb downstream 1.0kb downstream 13949 true scaffold00542: 3441037-3454985 Cucumis sativus
Cucsa.048820 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 3441037-3442036 Cucumis sativus
Cucsa.048820 2.0kb upstream 2.0kb upstream 14949 true scaffold00542: 3442037-3456985 Cucumis sativus
Cucsa.048820 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 3454986-3456985 Cucumis sativus
Cucsa.048820 2.0kb downstream 2.0kb downstream 14949 true scaffold00542: 3440037-3454985 Cucumis sativus
Cucsa.048820 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 3440037-3442036 Cucumis sativus
Cucsa.048820 5.0kb upstream 5.0kb upstream 17949 true scaffold00542: 3442037-3459985 Cucumis sativus
Cucsa.048820 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 3454986-3459985 Cucumis sativus
Cucsa.048820 5.0kb downstream 5.0kb downstream 17949 true scaffold00542: 3437037-3454985 Cucumis sativus
Cucsa.048820 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 3437037-3442036 Cucumis sativus
Cucsa.048820 10.0kb upstream 10.0kb upstream 22949 true scaffold00542: 3442037-3464985 Cucumis sativus
Cucsa.048820 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 3454986-3464985 Cucumis sativus
Cucsa.048820 10.0kb downstream 10.0kb downstream 22949 true scaffold00542: 3432037-3454985 Cucumis sativus
Cucsa.048820 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 3432037-3442036 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303827 5265 Fabidae View MSA
124068245 5270 Rosid View MSA
123740237 5271 Pentapetalae View MSA
122788545 5272 Eudicot View MSA
122042289 5273 Angiosperm View MSA
121346645 5274 Embryophyte View MSA
123425367 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain