Gene : Cucsa.042430 C. sativus v1.0
Defline:  (1 of 57) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  92
Name:  ? Cucsa.042430 Secondary Identifier:  ? PAC:16952928
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1081 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.042430 0.5kb upstream 0.5kb upstream 2398 true scaffold00540: 826138-828535 Cucumis sativus
Cucsa.042430 0.5kb upstream 0.5kb upstream 500 false scaffold00540: 828036-828535 Cucumis sativus
Cucsa.042430 0.5kb downstream 0.5kb downstream 2398 true scaffold00540: 825638-828035 Cucumis sativus
Cucsa.042430 0.5kb downstream 0.5kb downstream 500 false scaffold00540: 825638-826137 Cucumis sativus
Cucsa.042430 1.0kb upstream 1.0kb upstream 2898 true scaffold00540: 826138-829035 Cucumis sativus
Cucsa.042430 1.0kb upstream 1.0kb upstream 1000 false scaffold00540: 828036-829035 Cucumis sativus
Cucsa.042430 1.0kb downstream 1.0kb downstream 2898 true scaffold00540: 825138-828035 Cucumis sativus
Cucsa.042430 1.0kb downstream 1.0kb downstream 1000 false scaffold00540: 825138-826137 Cucumis sativus
Cucsa.042430 2.0kb upstream 2.0kb upstream 3898 true scaffold00540: 826138-830035 Cucumis sativus
Cucsa.042430 2.0kb upstream 2.0kb upstream 2000 false scaffold00540: 828036-830035 Cucumis sativus
Cucsa.042430 2.0kb downstream 2.0kb downstream 3898 true scaffold00540: 824138-828035 Cucumis sativus
Cucsa.042430 2.0kb downstream 2.0kb downstream 2000 false scaffold00540: 824138-826137 Cucumis sativus
Cucsa.042430 5.0kb upstream 5.0kb upstream 6898 true scaffold00540: 826138-833035 Cucumis sativus
Cucsa.042430 5.0kb upstream 5.0kb upstream 5000 false scaffold00540: 828036-833035 Cucumis sativus
Cucsa.042430 5.0kb downstream 5.0kb downstream 6898 true scaffold00540: 821138-828035 Cucumis sativus
Cucsa.042430 5.0kb downstream 5.0kb downstream 5000 false scaffold00540: 821138-826137 Cucumis sativus
Cucsa.042430 10.0kb upstream 10.0kb upstream 11898 true scaffold00540: 826138-838035 Cucumis sativus
Cucsa.042430 10.0kb upstream 10.0kb upstream 10000 false scaffold00540: 828036-838035 Cucumis sativus
Cucsa.042430 10.0kb downstream 10.0kb downstream 11898 true scaffold00540: 816138-828035 Cucumis sativus
Cucsa.042430 10.0kb downstream 10.0kb downstream 10000 false scaffold00540: 816138-826137 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237233 5265 Fabidae View MSA
123983098 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain