Gene : Cucsa.011940 C. sativus v1.0
Defline:  (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  132
Name:  ? Cucsa.011940 Secondary Identifier:  ? PAC:16951480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.011940 0.5kb upstream 0.5kb upstream 1808 true scaffold00154: 1336224-1338031 Cucumis sativus
Cucsa.011940 0.5kb upstream 0.5kb upstream 500 false scaffold00154: 1337532-1338031 Cucumis sativus
Cucsa.011940 0.5kb downstream 0.5kb downstream 1808 true scaffold00154: 1335724-1337531 Cucumis sativus
Cucsa.011940 0.5kb downstream 0.5kb downstream 500 false scaffold00154: 1335724-1336223 Cucumis sativus
Cucsa.011940 1.0kb upstream 1.0kb upstream 2308 true scaffold00154: 1336224-1338531 Cucumis sativus
Cucsa.011940 1.0kb upstream 1.0kb upstream 1000 false scaffold00154: 1337532-1338531 Cucumis sativus
Cucsa.011940 1.0kb downstream 1.0kb downstream 2308 true scaffold00154: 1335224-1337531 Cucumis sativus
Cucsa.011940 1.0kb downstream 1.0kb downstream 1000 false scaffold00154: 1335224-1336223 Cucumis sativus
Cucsa.011940 2.0kb upstream 2.0kb upstream 3308 true scaffold00154: 1336224-1339531 Cucumis sativus
Cucsa.011940 2.0kb upstream 2.0kb upstream 2000 false scaffold00154: 1337532-1339531 Cucumis sativus
Cucsa.011940 2.0kb downstream 2.0kb downstream 3308 true scaffold00154: 1334224-1337531 Cucumis sativus
Cucsa.011940 2.0kb downstream 2.0kb downstream 2000 false scaffold00154: 1334224-1336223 Cucumis sativus
Cucsa.011940 5.0kb upstream 5.0kb upstream 6308 true scaffold00154: 1336224-1342531 Cucumis sativus
Cucsa.011940 5.0kb upstream 5.0kb upstream 5000 false scaffold00154: 1337532-1342531 Cucumis sativus
Cucsa.011940 5.0kb downstream 5.0kb downstream 6308 true scaffold00154: 1331224-1337531 Cucumis sativus
Cucsa.011940 5.0kb downstream 5.0kb downstream 5000 false scaffold00154: 1331224-1336223 Cucumis sativus
Cucsa.011940 10.0kb upstream 10.0kb upstream 11308 true scaffold00154: 1336224-1347531 Cucumis sativus
Cucsa.011940 10.0kb upstream 10.0kb upstream 10000 false scaffold00154: 1337532-1347531 Cucumis sativus
Cucsa.011940 10.0kb downstream 10.0kb downstream 11308 true scaffold00154: 1326224-1337531 Cucumis sativus
Cucsa.011940 10.0kb downstream 10.0kb downstream 10000 false scaffold00154: 1326224-1336223 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029855 5273 Angiosperm View MSA
122315290 5265 Fabidae View MSA
124038140 5270 Rosid View MSA
123753008 5271 Pentapetalae View MSA
122774914 5272 Eudicot View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain