Gene : Cucsa.005370 C. sativus v1.0
Defline:  (1 of 2) PTHR24423:SF519 - PHYTOCHROME A Genomic Order:  46
Name:  ? Cucsa.005370 Secondary Identifier:  ? PAC:16951135
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.005370 0.5kb upstream 0.5kb upstream 7034 true scaffold00055: 477910-484943 Cucumis sativus
Cucsa.005370 0.5kb upstream 0.5kb upstream 500 false scaffold00055: 477910-478409 Cucumis sativus
Cucsa.005370 0.5kb downstream 0.5kb downstream 7034 true scaffold00055: 478410-485443 Cucumis sativus
Cucsa.005370 0.5kb downstream 0.5kb downstream 500 false scaffold00055: 484944-485443 Cucumis sativus
Cucsa.005370 1.0kb upstream 1.0kb upstream 7534 true scaffold00055: 477410-484943 Cucumis sativus
Cucsa.005370 1.0kb upstream 1.0kb upstream 1000 false scaffold00055: 477410-478409 Cucumis sativus
Cucsa.005370 1.0kb downstream 1.0kb downstream 7534 true scaffold00055: 478410-485943 Cucumis sativus
Cucsa.005370 1.0kb downstream 1.0kb downstream 1000 false scaffold00055: 484944-485943 Cucumis sativus
Cucsa.005370 2.0kb upstream 2.0kb upstream 8534 true scaffold00055: 476410-484943 Cucumis sativus
Cucsa.005370 2.0kb upstream 2.0kb upstream 2000 false scaffold00055: 476410-478409 Cucumis sativus
Cucsa.005370 2.0kb downstream 2.0kb downstream 8534 true scaffold00055: 478410-486943 Cucumis sativus
Cucsa.005370 2.0kb downstream 2.0kb downstream 2000 false scaffold00055: 484944-486943 Cucumis sativus
Cucsa.005370 5.0kb upstream 5.0kb upstream 11534 true scaffold00055: 473410-484943 Cucumis sativus
Cucsa.005370 5.0kb upstream 5.0kb upstream 5000 false scaffold00055: 473410-478409 Cucumis sativus
Cucsa.005370 5.0kb downstream 5.0kb downstream 11534 true scaffold00055: 478410-489943 Cucumis sativus
Cucsa.005370 5.0kb downstream 5.0kb downstream 5000 false scaffold00055: 484944-489943 Cucumis sativus
Cucsa.005370 10.0kb upstream 10.0kb upstream 16534 true scaffold00055: 468410-484943 Cucumis sativus
Cucsa.005370 10.0kb upstream 10.0kb upstream 10000 false scaffold00055: 468410-478409 Cucumis sativus
Cucsa.005370 10.0kb downstream 10.0kb downstream 16534 true scaffold00055: 478410-494943 Cucumis sativus
Cucsa.005370 10.0kb downstream 10.0kb downstream 10000 false scaffold00055: 484944-494943 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299283 5265 Fabidae View MSA
124063137 5270 Rosid View MSA
123743412 5271 Pentapetalae View MSA
122786313 5272 Eudicot View MSA
122046553 5273 Angiosperm View MSA
121310619 5274 Embryophyte View MSA
123348057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain