Protein Family : phytochrome A 122046553

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  74
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74 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30128.t000458 (1 of 1) K12120 - phytochrome A (PHYA) R. communis v0.1 4481   30128: 2079834-2084314
Cucsa.005370 (1 of 2) PTHR24423:SF519 - PHYTOCHROME A C. sativus v1.0 6534   scaffold00055: 478410-484943
orange1.1g001235m.g (1 of 1) PTHR24423:SF519 - PHYTOCHROME A C. sinensis v1.1 5687   scaffold00102: 144838-150524
AT1G09570 (1 of 1) K12120 - phytochrome A (PHYA) A. thaliana TAIR10 PHYA 5102   Chr1: 3095256-3100357
Thhalv10006625m.g (1 of 1) PTHR24423:SF519 - PHYTOCHROME A E. salsugineum v1.0 5615   scaffold_5: 12487679-12493293
Ciclev10027712m.g (1 of 1) PTHR24423:SF519 - PHYTOCHROME A C. clementina v1.0 5809   scaffold_8: 16574011-16579819
Lus10012151.g (1 of 2) PTHR24423:SF519 - PHYTOCHROME A L. usitatissimum v1.0 3638   scaffold1186: 204511-208148
Lus10007594.g (1 of 2) PTHR24423:SF519 - PHYTOCHROME A L. usitatissimum v1.0 3634   scaffold259: 281426-285059
Gorai.013G203900 (1 of 2) PTHR24423:SF519 - PHYTOCHROME A G. raimondii v2.1 4493   Chr13: 51479882-51484374
Gorai.007G292800 (1 of 2) PTHR24423:SF519 - PHYTOCHROME A G. raimondii v2.1 5860   Chr07: 50235296-50241155
Thecc1EG047056 (1 of 1) PTHR24423//PTHR24423:SF519 - TWO-COMPONENT SENSOR HISTIDINE KINASE // PHYTOCHROME A T. cacao v1.1 6030   scaffold_5: 40361815-40367844
Migut.N00986 (1 of 2) PTHR24423:SF519 - PHYTOCHROME A M. guttatus v2.0 5834   scaffold_14: 7013009-7018842
Migut.B00907 (1 of 2) PTHR24423:SF519 - PHYTOCHROME A M. guttatus v2.0 5879   scaffold_2: 6084727-6090605
Araha.3403s0047 (1 of 1) PTHR24423:SF519 - PHYTOCHROME A A. halleri v1.1 5083   Scaffold3403: 156280-161362
Cagra.4395s0142 (1 of 1) PTHR24423:SF519 - PHYTOCHROME A C. grandiflora v1.1 5411   Scaffold4395: 553413-558823
Glyma.20G090000 (1 of 4) PTHR24423:SF519 - PHYTOCHROME A G. max Wm82.a2.v1 5675   Chr20: 33236018-33241692
Brara.I05264 (1 of 2) PTHR24423:SF519 - PHYTOCHROME A B. rapa FPsc v1.3 5369   A09: 43048260-43053628
Brara.F00612 (1 of 2) PTHR24423:SF519 - PHYTOCHROME A B. rapa FPsc v1.3 5071   A06: 3561848-3566918
Bostr.25494s0015 (1 of 1) PTHR24423:SF519 - PHYTOCHROME A B. stricta v1.2 5690   Scaffold25494: 68807-74496
Medtr1g085160 (1 of 1) PTHR24423:SF519 - PHYTOCHROME A M. truncatula Mt4.0v1 5441   chr1: 38021654-38027094
SapurV1A.0442s0310 (1 of 1) K12120 - phytochrome A (PHYA) S. purpurea v1.0 6268   chr13: 29259-35526
evm_27.TU.AmTr_v1.0_scaffold00045.165 (1 of 1) PTHR24423:SF519 - PHYTOCHROME A A. trichopoda v1.0 5800   AmTr_v1.0_scaffold00045: 2314329-2320128
Traes_4AL_F46203719 (1 of 3) PTHR24423:SF519 - PHYTOCHROME A T. aestivum v2.2 7643   ta_iwgsc_4al_v2_7157961: 4699-12341
Traes_4DS_9C6CD24ED (1 of 3) PTHR24423:SF519 - PHYTOCHROME A T. aestivum v2.2 7138   ta_iwgsc_4ds_v1_2285617: 5723-12860
Eucgr.B01356 (1 of 1) PTHR24423:SF519 - PHYTOCHROME A E. grandis v2.0 5782   Chr02: 26233663-26239444
Prupe.6G302500 (1 of 1) PTHR24423:SF519 - PHYTOCHROME A P. persica v2.1 5191   Pp06: 27435067-27440257
GSMUA_Achr8G06130_001 (1 of 2) PTHR24423:SF519 - PHYTOCHROME A M. acuminata v1 5742   chr8: 3984520-3990261
Manes.09G182500 (1 of 1) PTHR24423:SF519 - PHYTOCHROME A M. esculenta v6.1 5868   Chromosome09: 28965545-28971412
Kalax.0172s0035 (1 of 4) PTHR24423:SF519 - PHYTOCHROME A K. laxiflora v1.1 5824   scaffold_172: 303593-309416
Kalax.0038s0184 (1 of 4) PTHR24423:SF519 - PHYTOCHROME A K. laxiflora v1.1 5760   scaffold_38: 1264444-1270203

74 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30128.m008997 R. communis v0.1 122046553 phytochrome A 1 5273 Angiosperm
orange1.1g001235m C. sinensis v1.1 122046553 phytochrome A 1 5273 Angiosperm
AT1G09570.1 A. thaliana TAIR10 122046553 phytochrome A 1 5273 Angiosperm
Lus10007594 L. usitatissimum v1.0 122046553 phytochrome A 2 5273 Angiosperm
Cagra.4395s0142.1.p C. grandiflora v1.1 122046553 phytochrome A 1 5273 Angiosperm
Glyma.20G090000.1.p G. max Wm82.a2.v1 122046553 phytochrome A 1 5273 Angiosperm
Brara.I05264.1.p B. rapa FPsc v1.3 122046553 phytochrome A 2 5273 Angiosperm
Medtr1g085160.1 M. truncatula Mt4.0v1 122046553 phytochrome A 1 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00045.165 A. trichopoda v1.0 122046553 phytochrome A 1 5273 Angiosperm
Traes_4DS_9C6CD24ED.1 T. aestivum v2.2 122046553 phytochrome A 2 5273 Angiosperm
Traes_4AL_F46203719.1 T. aestivum v2.2 122046553 phytochrome A 2 5273 Angiosperm
GSMUA_Achr8P06130_001 M. acuminata v1 122046553 phytochrome A 1 5273 Angiosperm
Manes.09G182500.1.p M. esculenta v6.1 122046553 phytochrome A 1 5273 Angiosperm
Kalax.0172s0035.1.p K. laxiflora v1.1 122046553 phytochrome A 2 5273 Angiosperm
Seita.9G113600.1.p S. italica v2.2 122046553 phytochrome A 1 5273 Angiosperm
Bradi1g10520.1.p B. distachyon v3.1 122046553 phytochrome A 1 5273 Angiosperm
Brast02G285900.1.p B. stacei v1.1 122046553 phytochrome A 1 5273 Angiosperm
Aco013637.1 A. comosus v3 122046553 phytochrome A 1 5273 Angiosperm
Aqcoe5G289400.1.p A. coerulea v3.1 122046553 phytochrome A 1 5273 Angiosperm
LOC_Os03g51030.3 O. sativa v7.0 122046553 phytochrome A 1 5273 Angiosperm
Zosma79g00550.1 Z. marina v2.2 122046553 phytochrome A 1 5273 Angiosperm
Kaladp0057s0072.1.p K. fedtschenkoi v1.1 122046553 phytochrome A 1 5273 Angiosperm
Tp57577_TGAC_v2_mRNA36085 T. pratense v2 122046553 phytochrome A 1 5273 Angiosperm
DCAR_001880 D. carota v2.0 122046553 phytochrome A 2 5273 Angiosperm
DCAR_029306 D. carota v2.0 122046553 phytochrome A 2 5273 Angiosperm
Solyc10g044670.1.1 S. lycopersicum ITAG2.4 122046553 phytochrome A 1 5273 Angiosperm
AUR62003557-RA C. quinoa v1.0 122046553 phytochrome A 2 5273 Angiosperm
Zm00008a005020_P01 Z. mays PH207 v1.1 122046553 phytochrome A 2 5273 Angiosperm
Pavir.5KG291600.1.p P. virgatum v4.1 122046553 phytochrome A 2 5273 Angiosperm
Pavir.9NG128200.1.p P. virgatum v4.1 122046553 phytochrome A 2 5273 Angiosperm