Gene : Eucgr.B01356 E. grandis v2.0
Defline:  (1 of 1) PTHR24423:SF519 - PHYTOCHROME A Genomic Order:  1282
Name:  ? Eucgr.B01356 Secondary Identifier:  ? PAC:32061249
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01356 0.5kb upstream 0.5kb upstream 6282 true Chr02: 26233163-26239444 Eucalyptus grandis
Eucgr.B01356 0.5kb upstream 0.5kb upstream 500 false Chr02: 26233163-26233662 Eucalyptus grandis
Eucgr.B01356 0.5kb downstream 0.5kb downstream 6282 true Chr02: 26233663-26239944 Eucalyptus grandis
Eucgr.B01356 0.5kb downstream 0.5kb downstream 500 false Chr02: 26239445-26239944 Eucalyptus grandis
Eucgr.B01356 1.0kb upstream 1.0kb upstream 6782 true Chr02: 26232663-26239444 Eucalyptus grandis
Eucgr.B01356 1.0kb upstream 1.0kb upstream 1000 false Chr02: 26232663-26233662 Eucalyptus grandis
Eucgr.B01356 1.0kb downstream 1.0kb downstream 6782 true Chr02: 26233663-26240444 Eucalyptus grandis
Eucgr.B01356 1.0kb downstream 1.0kb downstream 1000 false Chr02: 26239445-26240444 Eucalyptus grandis
Eucgr.B01356 2.0kb upstream 2.0kb upstream 7782 true Chr02: 26231663-26239444 Eucalyptus grandis
Eucgr.B01356 2.0kb upstream 2.0kb upstream 2000 false Chr02: 26231663-26233662 Eucalyptus grandis
Eucgr.B01356 2.0kb downstream 2.0kb downstream 7782 true Chr02: 26233663-26241444 Eucalyptus grandis
Eucgr.B01356 2.0kb downstream 2.0kb downstream 2000 false Chr02: 26239445-26241444 Eucalyptus grandis
Eucgr.B01356 5.0kb upstream 5.0kb upstream 10782 true Chr02: 26228663-26239444 Eucalyptus grandis
Eucgr.B01356 5.0kb upstream 5.0kb upstream 5000 false Chr02: 26228663-26233662 Eucalyptus grandis
Eucgr.B01356 5.0kb downstream 5.0kb downstream 10782 true Chr02: 26233663-26244444 Eucalyptus grandis
Eucgr.B01356 5.0kb downstream 5.0kb downstream 5000 false Chr02: 26239445-26244444 Eucalyptus grandis
Eucgr.B01356 10.0kb upstream 10.0kb upstream 15782 true Chr02: 26223663-26239444 Eucalyptus grandis
Eucgr.B01356 10.0kb upstream 10.0kb upstream 10000 false Chr02: 26223663-26233662 Eucalyptus grandis
Eucgr.B01356 10.0kb downstream 10.0kb downstream 15782 true Chr02: 26233663-26249444 Eucalyptus grandis
Eucgr.B01356 10.0kb downstream 10.0kb downstream 10000 false Chr02: 26239445-26249444 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063137 5270 Rosid View MSA
123743412 5271 Pentapetalae View MSA
122786313 5272 Eudicot View MSA
122046553 5273 Angiosperm View MSA
121310619 5274 Embryophyte View MSA
123348057 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.0069 0.0 7.05242    
cufflinks 1.95743 0.0 4.79685    
cufflinks 2.51215 0.0 5.97078    
cufflinks 3.74827 0.0 10.7754    
cufflinks 5.89606 0.0 13.5241   High
cufflinks 1.83791 0.0 4.6331   Low

0 Strain