Gene : Thecc1EG047056 T. cacao v1.1
Defline:  (1 of 1) PTHR24423//PTHR24423:SF519 - TWO-COMPONENT SENSOR HISTIDINE KINASE // PHYTOCHROME A Genomic Order:  3286
Name:  ? Thecc1EG047056 Secondary Identifier:  ? PAC:27421760
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047056 0.5kb upstream 0.5kb upstream 6530 true scaffold_5: 40361815-40368344 Theobroma cacao
Thecc1EG047056 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 40367845-40368344 Theobroma cacao
Thecc1EG047056 0.5kb downstream 0.5kb downstream 6530 true scaffold_5: 40361315-40367844 Theobroma cacao
Thecc1EG047056 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 40361315-40361814 Theobroma cacao
Thecc1EG047056 1.0kb upstream 1.0kb upstream 7030 true scaffold_5: 40361815-40368844 Theobroma cacao
Thecc1EG047056 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 40367845-40368844 Theobroma cacao
Thecc1EG047056 1.0kb downstream 1.0kb downstream 7030 true scaffold_5: 40360815-40367844 Theobroma cacao
Thecc1EG047056 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 40360815-40361814 Theobroma cacao
Thecc1EG047056 2.0kb upstream 2.0kb upstream 8030 true scaffold_5: 40361815-40369844 Theobroma cacao
Thecc1EG047056 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 40367845-40369844 Theobroma cacao
Thecc1EG047056 2.0kb downstream 2.0kb downstream 8030 true scaffold_5: 40359815-40367844 Theobroma cacao
Thecc1EG047056 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 40359815-40361814 Theobroma cacao
Thecc1EG047056 5.0kb upstream 5.0kb upstream 11030 true scaffold_5: 40361815-40372844 Theobroma cacao
Thecc1EG047056 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 40367845-40372844 Theobroma cacao
Thecc1EG047056 5.0kb downstream 5.0kb downstream 11030 true scaffold_5: 40356815-40367844 Theobroma cacao
Thecc1EG047056 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 40356815-40361814 Theobroma cacao
Thecc1EG047056 10.0kb upstream 10.0kb upstream 16030 true scaffold_5: 40361815-40377844 Theobroma cacao
Thecc1EG047056 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 40367845-40377844 Theobroma cacao
Thecc1EG047056 10.0kb downstream 10.0kb downstream 16030 true scaffold_5: 40351815-40367844 Theobroma cacao
Thecc1EG047056 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 40351815-40361814 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829653 5264 Brassicales-Malvales View MSA
124339905 5266 SBM View MSA
124253959 5268 Malvidae View MSA
124063137 5270 Rosid View MSA
123743412 5271 Pentapetalae View MSA
122786313 5272 Eudicot View MSA
122046553 5273 Angiosperm View MSA
121310619 5274 Embryophyte View MSA
123348057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain