Gene : Brara.I05264 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR24423:SF519 - PHYTOCHROME A Genomic Order:  5264
Name:  ? Brara.I05264 Secondary Identifier:  ? PAC:30646713
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05264 0.5kb upstream 0.5kb upstream 5869 true A09: 43047760-43053628 Brassica rapa FPsc
Brara.I05264 0.5kb upstream 0.5kb upstream 500 false A09: 43047760-43048259 Brassica rapa FPsc
Brara.I05264 0.5kb downstream 0.5kb downstream 5869 true A09: 43048260-43054128 Brassica rapa FPsc
Brara.I05264 0.5kb downstream 0.5kb downstream 500 false A09: 43053629-43054128 Brassica rapa FPsc
Brara.I05264 1.0kb upstream 1.0kb upstream 6369 true A09: 43047260-43053628 Brassica rapa FPsc
Brara.I05264 1.0kb upstream 1.0kb upstream 1000 false A09: 43047260-43048259 Brassica rapa FPsc
Brara.I05264 1.0kb downstream 1.0kb downstream 6369 true A09: 43048260-43054628 Brassica rapa FPsc
Brara.I05264 1.0kb downstream 1.0kb downstream 1000 false A09: 43053629-43054628 Brassica rapa FPsc
Brara.I05264 2.0kb upstream 2.0kb upstream 7369 true A09: 43046260-43053628 Brassica rapa FPsc
Brara.I05264 2.0kb upstream 2.0kb upstream 2000 false A09: 43046260-43048259 Brassica rapa FPsc
Brara.I05264 2.0kb downstream 2.0kb downstream 7369 true A09: 43048260-43055628 Brassica rapa FPsc
Brara.I05264 2.0kb downstream 2.0kb downstream 2000 false A09: 43053629-43055628 Brassica rapa FPsc
Brara.I05264 5.0kb upstream 5.0kb upstream 10369 true A09: 43043260-43053628 Brassica rapa FPsc
Brara.I05264 5.0kb upstream 5.0kb upstream 5000 false A09: 43043260-43048259 Brassica rapa FPsc
Brara.I05264 5.0kb downstream 5.0kb downstream 10369 true A09: 43048260-43058628 Brassica rapa FPsc
Brara.I05264 5.0kb downstream 5.0kb downstream 5000 false A09: 43053629-43058628 Brassica rapa FPsc
Brara.I05264 10.0kb upstream 10.0kb upstream 15369 true A09: 43038260-43053628 Brassica rapa FPsc
Brara.I05264 10.0kb upstream 10.0kb upstream 10000 false A09: 43038260-43048259 Brassica rapa FPsc
Brara.I05264 10.0kb downstream 10.0kb downstream 15369 true A09: 43048260-43063628 Brassica rapa FPsc
Brara.I05264 10.0kb downstream 10.0kb downstream 10000 false A09: 43053629-43063628 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354724 5261 Brassicaceae Singleton cluster - no MSA
123793076 5264 Brassicales-Malvales Singleton cluster - no MSA
124290931 5266 SBM Singleton cluster - no MSA
124143975 5268 Malvidae Singleton cluster - no MSA
123870586 5270 Rosid Singleton cluster - no MSA
123743412 5271 Pentapetalae View MSA
122786313 5272 Eudicot View MSA
122046553 5273 Angiosperm View MSA
121310619 5274 Embryophyte View MSA
123348057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier