Gene : Cucsa.042120 C. sativus v1.0
Defline:  (1 of 1) PTHR11254:SF291 - E3 UBIQUITIN-PROTEIN LIGASE HUWE1 Genomic Order:  65
Name:  ? Cucsa.042120 Secondary Identifier:  ? PAC:16952880
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.042120 0.5kb upstream 0.5kb upstream 14737 true scaffold00540: 598315-613051 Cucumis sativus
Cucsa.042120 0.5kb upstream 0.5kb upstream 500 false scaffold00540: 612552-613051 Cucumis sativus
Cucsa.042120 0.5kb downstream 0.5kb downstream 14737 true scaffold00540: 597815-612551 Cucumis sativus
Cucsa.042120 0.5kb downstream 0.5kb downstream 500 false scaffold00540: 597815-598314 Cucumis sativus
Cucsa.042120 1.0kb upstream 1.0kb upstream 15237 true scaffold00540: 598315-613551 Cucumis sativus
Cucsa.042120 1.0kb upstream 1.0kb upstream 1000 false scaffold00540: 612552-613551 Cucumis sativus
Cucsa.042120 1.0kb downstream 1.0kb downstream 15237 true scaffold00540: 597315-612551 Cucumis sativus
Cucsa.042120 1.0kb downstream 1.0kb downstream 1000 false scaffold00540: 597315-598314 Cucumis sativus
Cucsa.042120 2.0kb upstream 2.0kb upstream 16237 true scaffold00540: 598315-614551 Cucumis sativus
Cucsa.042120 2.0kb upstream 2.0kb upstream 2000 false scaffold00540: 612552-614551 Cucumis sativus
Cucsa.042120 2.0kb downstream 2.0kb downstream 16237 true scaffold00540: 596315-612551 Cucumis sativus
Cucsa.042120 2.0kb downstream 2.0kb downstream 2000 false scaffold00540: 596315-598314 Cucumis sativus
Cucsa.042120 5.0kb upstream 5.0kb upstream 19237 true scaffold00540: 598315-617551 Cucumis sativus
Cucsa.042120 5.0kb upstream 5.0kb upstream 5000 false scaffold00540: 612552-617551 Cucumis sativus
Cucsa.042120 5.0kb downstream 5.0kb downstream 19237 true scaffold00540: 593315-612551 Cucumis sativus
Cucsa.042120 5.0kb downstream 5.0kb downstream 5000 false scaffold00540: 593315-598314 Cucumis sativus
Cucsa.042120 10.0kb upstream 10.0kb upstream 24237 true scaffold00540: 598315-622551 Cucumis sativus
Cucsa.042120 10.0kb upstream 10.0kb upstream 10000 false scaffold00540: 612552-622551 Cucumis sativus
Cucsa.042120 10.0kb downstream 10.0kb downstream 24237 true scaffold00540: 588315-612551 Cucumis sativus
Cucsa.042120 10.0kb downstream 10.0kb downstream 10000 false scaffold00540: 588315-598314 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040976 5273 Angiosperm View MSA
122308419 5265 Fabidae View MSA
124061643 5270 Rosid View MSA
123745236 5271 Pentapetalae View MSA
122795770 5272 Eudicot View MSA
121349056 5274 Embryophyte View MSA
123425440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain