Gene : Cucsa.039090 C. sativus v1.0
Defline:  (1 of 1) 2.4.99.12 - Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase / Lipid IV(A) KDO transferase Genomic Order:  1
Name:  ? Cucsa.039090 Secondary Identifier:  ? PAC:16952749
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus KDOSYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.039090 0.5kb upstream 0.5kb upstream 6760 true scaffold00511: 4399-11158 Cucumis sativus
Cucsa.039090 0.5kb upstream 0.5kb upstream 500 false scaffold00511: 10659-11158 Cucumis sativus
Cucsa.039090 0.5kb downstream 0.5kb downstream 6760 true scaffold00511: 3899-10658 Cucumis sativus
Cucsa.039090 0.5kb downstream 0.5kb downstream 500 false scaffold00511: 3899-4398 Cucumis sativus
Cucsa.039090 1.0kb upstream 1.0kb upstream 7260 true scaffold00511: 4399-11658 Cucumis sativus
Cucsa.039090 1.0kb upstream 1.0kb upstream 1000 false scaffold00511: 10659-11658 Cucumis sativus
Cucsa.039090 1.0kb downstream 1.0kb downstream 7260 true scaffold00511: 3399-10658 Cucumis sativus
Cucsa.039090 1.0kb downstream 1.0kb downstream 1000 false scaffold00511: 3399-4398 Cucumis sativus
Cucsa.039090 2.0kb upstream 2.0kb upstream 8260 true scaffold00511: 4399-12658 Cucumis sativus
Cucsa.039090 2.0kb upstream 2.0kb upstream 2000 false scaffold00511: 10659-12658 Cucumis sativus
Cucsa.039090 2.0kb downstream 2.0kb downstream 8260 true scaffold00511: 2399-10658 Cucumis sativus
Cucsa.039090 2.0kb downstream 2.0kb downstream 2000 false scaffold00511: 2399-4398 Cucumis sativus
Cucsa.039090 5.0kb upstream 5.0kb upstream 9713 true scaffold00511: 4399-14111 Cucumis sativus
Cucsa.039090 5.0kb upstream 5.0kb upstream 3453 false scaffold00511: 10659-14111 Cucumis sativus
Cucsa.039090 5.0kb downstream 5.0kb downstream 10658 true scaffold00511: 1-10658 Cucumis sativus
Cucsa.039090 5.0kb downstream 5.0kb downstream 4398 false scaffold00511: 1-4398 Cucumis sativus
Cucsa.039090 10.0kb upstream 10.0kb upstream 9713 true scaffold00511: 4399-14111 Cucumis sativus
Cucsa.039090 10.0kb upstream 10.0kb upstream 3453 false scaffold00511: 10659-14111 Cucumis sativus
Cucsa.039090 10.0kb downstream 10.0kb downstream 10658 true scaffold00511: 1-10658 Cucumis sativus
Cucsa.039090 10.0kb downstream 10.0kb downstream 4398 false scaffold00511: 1-4398 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305101 5265 Fabidae View MSA
124064068 5270 Rosid View MSA
123737995 5271 Pentapetalae View MSA
122793703 5272 Eudicot View MSA
122042607 5273 Angiosperm View MSA
121344444 5274 Embryophyte View MSA
123380045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain