Gene : Cucsa.079670 C. sativus v1.0
Defline:  (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  178
Name:  ? Cucsa.079670 Secondary Identifier:  ? PAC:16956246
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.079670 0.5kb upstream 0.5kb upstream 1598 true scaffold00793: 2541465-2543062 Cucumis sativus
Cucsa.079670 0.5kb upstream 0.5kb upstream 500 false scaffold00793: 2542563-2543062 Cucumis sativus
Cucsa.079670 0.5kb downstream 0.5kb downstream 1598 true scaffold00793: 2540965-2542562 Cucumis sativus
Cucsa.079670 0.5kb downstream 0.5kb downstream 500 false scaffold00793: 2540965-2541464 Cucumis sativus
Cucsa.079670 1.0kb upstream 1.0kb upstream 2098 true scaffold00793: 2541465-2543562 Cucumis sativus
Cucsa.079670 1.0kb upstream 1.0kb upstream 1000 false scaffold00793: 2542563-2543562 Cucumis sativus
Cucsa.079670 1.0kb downstream 1.0kb downstream 2098 true scaffold00793: 2540465-2542562 Cucumis sativus
Cucsa.079670 1.0kb downstream 1.0kb downstream 1000 false scaffold00793: 2540465-2541464 Cucumis sativus
Cucsa.079670 2.0kb upstream 2.0kb upstream 3098 true scaffold00793: 2541465-2544562 Cucumis sativus
Cucsa.079670 2.0kb upstream 2.0kb upstream 2000 false scaffold00793: 2542563-2544562 Cucumis sativus
Cucsa.079670 2.0kb downstream 2.0kb downstream 3098 true scaffold00793: 2539465-2542562 Cucumis sativus
Cucsa.079670 2.0kb downstream 2.0kb downstream 2000 false scaffold00793: 2539465-2541464 Cucumis sativus
Cucsa.079670 5.0kb upstream 5.0kb upstream 6098 true scaffold00793: 2541465-2547562 Cucumis sativus
Cucsa.079670 5.0kb upstream 5.0kb upstream 5000 false scaffold00793: 2542563-2547562 Cucumis sativus
Cucsa.079670 5.0kb downstream 5.0kb downstream 6098 true scaffold00793: 2536465-2542562 Cucumis sativus
Cucsa.079670 5.0kb downstream 5.0kb downstream 5000 false scaffold00793: 2536465-2541464 Cucumis sativus
Cucsa.079670 10.0kb upstream 10.0kb upstream 11098 true scaffold00793: 2541465-2552562 Cucumis sativus
Cucsa.079670 10.0kb upstream 10.0kb upstream 10000 false scaffold00793: 2542563-2552562 Cucumis sativus
Cucsa.079670 10.0kb downstream 10.0kb downstream 11098 true scaffold00793: 2531465-2542562 Cucumis sativus
Cucsa.079670 10.0kb downstream 10.0kb downstream 10000 false scaffold00793: 2531465-2541464 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121602336 5273 Angiosperm Singleton cluster - no MSA
122232578 5265 Fabidae Singleton cluster - no MSA
123978811 5270 Rosid Singleton cluster - no MSA
123554488 5271 Pentapetalae Singleton cluster - no MSA
122589302 5272 Eudicot Singleton cluster - no MSA
120874627 5274 Embryophyte Singleton cluster - no MSA
122915518 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain