Gene : Cucsa.088050 C. sativus v1.0
Defline:  (1 of 1) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED Genomic Order:  58
Name:  ? Cucsa.088050 Secondary Identifier:  ? PAC:16956951
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.088050 0.5kb upstream 0.5kb upstream 4511 true scaffold00888: 475304-479814 Cucumis sativus
Cucsa.088050 0.5kb upstream 0.5kb upstream 500 false scaffold00888: 479315-479814 Cucumis sativus
Cucsa.088050 0.5kb downstream 0.5kb downstream 4511 true scaffold00888: 474804-479314 Cucumis sativus
Cucsa.088050 0.5kb downstream 0.5kb downstream 500 false scaffold00888: 474804-475303 Cucumis sativus
Cucsa.088050 1.0kb upstream 1.0kb upstream 5011 true scaffold00888: 475304-480314 Cucumis sativus
Cucsa.088050 1.0kb upstream 1.0kb upstream 1000 false scaffold00888: 479315-480314 Cucumis sativus
Cucsa.088050 1.0kb downstream 1.0kb downstream 5011 true scaffold00888: 474304-479314 Cucumis sativus
Cucsa.088050 1.0kb downstream 1.0kb downstream 1000 false scaffold00888: 474304-475303 Cucumis sativus
Cucsa.088050 2.0kb upstream 2.0kb upstream 6011 true scaffold00888: 475304-481314 Cucumis sativus
Cucsa.088050 2.0kb upstream 2.0kb upstream 2000 false scaffold00888: 479315-481314 Cucumis sativus
Cucsa.088050 2.0kb downstream 2.0kb downstream 6011 true scaffold00888: 473304-479314 Cucumis sativus
Cucsa.088050 2.0kb downstream 2.0kb downstream 2000 false scaffold00888: 473304-475303 Cucumis sativus
Cucsa.088050 5.0kb upstream 5.0kb upstream 9011 true scaffold00888: 475304-484314 Cucumis sativus
Cucsa.088050 5.0kb upstream 5.0kb upstream 5000 false scaffold00888: 479315-484314 Cucumis sativus
Cucsa.088050 5.0kb downstream 5.0kb downstream 9011 true scaffold00888: 470304-479314 Cucumis sativus
Cucsa.088050 5.0kb downstream 5.0kb downstream 5000 false scaffold00888: 470304-475303 Cucumis sativus
Cucsa.088050 10.0kb upstream 10.0kb upstream 14011 true scaffold00888: 475304-489314 Cucumis sativus
Cucsa.088050 10.0kb upstream 10.0kb upstream 10000 false scaffold00888: 479315-489314 Cucumis sativus
Cucsa.088050 10.0kb downstream 10.0kb downstream 14011 true scaffold00888: 465304-479314 Cucumis sativus
Cucsa.088050 10.0kb downstream 10.0kb downstream 10000 false scaffold00888: 465304-475303 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041332 5273 Angiosperm View MSA
122301148 5265 Fabidae View MSA
124066763 5270 Rosid View MSA
123748218 5271 Pentapetalae View MSA
122792189 5272 Eudicot View MSA
121344762 5274 Embryophyte View MSA
123425409 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain