Protein Family : SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 123425409

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  81

81 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
146605 (1 of 2) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED S. moellendorffii v1.0 2561   scaffold_13: 499910-502470
27914.t000011 (1 of 1) K12825 - splicing factor 3A subunit 1 (SF3A1, SAP114) R. communis v0.1 4094   27914: 109311-113404
Cucsa.088050 (1 of 1) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED C. sativus v1.0 4011   scaffold00888: 475304-479314
orange1.1g004560m.g (1 of 1) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED C. sinensis v1.1 4435   scaffold00123: 79258-83692
AT1G14650 (1 of 2) PTHR15316//PTHR15316:SF1 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED // SPLICING FACTOR 3A SUBUNIT 1 A. thaliana TAIR10 4118   Chr1: 5027662-5031779
Thhalv10006856m.g (1 of 2) PF12230 - Pre-mRNA splicing factor PRP21 like protein (PRP21_like_P) E. salsugineum v1.0 3201   scaffold_5: 10431374-10434574
Ciclev10014300m.g (1 of 1) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED C. clementina v1.0 4048   scaffold_2: 370172-374219
Lus10035958.g (1 of 2) PF00240//PF01805//PF12230 - Ubiquitin family (ubiquitin) // Surp module (Surp) // Pre-mRNA splicing factor PRP21 like protein (PRP21_like_P) L. usitatissimum v1.0 2507   scaffold76: 446455-448961
Gorai.005G150700 (1 of 1) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED G. raimondii v2.1 4193   Chr05: 41887984-41892176
MicpuC2.fgenesh1_pg.C_scaffold_13000143 (1 of 1) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED M. pusilla CCMP1545 v3.0 2415   scaffold_13: 498949-501363
fgenesh2_pg.C_Chr_16000131 (1 of 1) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED M. sp RCC299 v3.0 2267   Chr_16: 371459-373725
ost_01_013_089 (1 of 1) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED O. lucimarinus v2.0 1908   Chr_1: 504544-506451
Thecc1EG011316 (1 of 1) K12825 - splicing factor 3A subunit 1 (SF3A1, SAP114) T. cacao v1.1 4454   scaffold_2: 39391894-39396347
Migut.B01299 (1 of 2) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED M. guttatus v2.0 4606   scaffold_2: 15127981-15132586
Cagra.3501s0031 (1 of 3) PTHR15316:SF1 - SPLICING FACTOR 3A SUBUNIT 1 C. grandiflora v1.1 2448   Scaffold3501: 113347-115794
Glyma.09G007700 (1 of 4) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED G. max Wm82.a2.v1 4380   Chr09: 571004-575383
Glyma.10G264400 (1 of 4) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED G. max Wm82.a2.v1 4852   Chr10: 48868487-48873338
Glyma.20G126000 (1 of 4) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED G. max Wm82.a2.v1 4290   Chr20: 36808696-36812985
Brara.H02564 (1 of 4) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED B. rapa FPsc v1.3 3447   A08: 20932757-20936203
Brara.F00990 (1 of 2) PTHR15316:SF1 - SPLICING FACTOR 3A SUBUNIT 1 B. rapa FPsc v1.3 2890   A06: 5701123-5704012
Bostr.23794s0369 (1 of 1) PF12230 - Pre-mRNA splicing factor PRP21 like protein (PRP21_like_P) B. stricta v1.2 3102   Scaffold23794: 2135291-2138392
Cre06.g307450 (1 of 1) K12825 - splicing factor 3A subunit 1 (SF3A1, SAP114) C. reinhardtii v5.6 6612   chromosome_6: 8458996-8465607
Medtr8g106170 (1 of 2) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED M. truncatula Mt4.0v1 5331   chr8: 44842026-44847356
SapurV1A.0404s0240 (1 of 1) K12825 - splicing factor 3A subunit 1 (SF3A1, SAP114) S. purpurea v1.0 4361   chr05: 6315739-6320099
evm_27.TU.AmTr_v1.0_scaffold00029.89 (1 of 1) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED A. trichopoda v1.0 3252   AmTr_v1.0_scaffold00029: 1146672-1149923
Traes_3B_3AAD70DFB (1 of 1) PF00240//PF01805//PF12230 - Ubiquitin family (ubiquitin) // Surp module (Surp) // Pre-mRNA splicing factor PRP21 like protein (PRP21_like_P) T. aestivum v2.2 4171   ta_iwgsc_3b_v1_10618292: 4703-8873
Eucgr.J00854 (1 of 1) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED E. grandis v2.0 5344   Chr10: 9187052-9192395
Prupe.1G077400 (1 of 2) PTHR15316:SF1 - SPLICING FACTOR 3A SUBUNIT 1 P. persica v2.1 4959   Pp01: 5586813-5591771
GSMUA_Achr3G03970_001 (1 of 2) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED M. acuminata v1 3069   chr3: 2555521-2558589
GSMUA_Achr9G12650_001 (1 of 2) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED M. acuminata v1 4125   chr9: 8229081-8233205

81 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
146605 S. moellendorffii v1.0 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
27914.m000418 R. communis v0.1 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Cucsa.088050.1 C. sativus v1.0 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
orange1.1g004560m C. sinensis v1.1 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
AT1G14650.1 A. thaliana TAIR10 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Thhalv10006856m E. salsugineum v1.0 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Ciclev10014300m C. clementina v1.0 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Lus10035958 L. usitatissimum v1.0 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Gorai.005G150700.1 G. raimondii v2.1 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
42493 M. pusilla CCMP1545 v3.0 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
104601 M. sp RCC299 v3.0 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
86131 O. lucimarinus v2.0 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Thecc1EG011316t1 T. cacao v1.1 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Migut.B01299.1.p M. guttatus v2.0 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Cagra.3501s0031.1.p C. grandiflora v1.1 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Glyma.20G126000.1.p G. max Wm82.a2.v1 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 3 5275 Viridiplantae
Glyma.09G007700.1.p G. max Wm82.a2.v1 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 3 5275 Viridiplantae
Glyma.10G264400.1.p G. max Wm82.a2.v1 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 3 5275 Viridiplantae
Brara.F00990.1.p B. rapa FPsc v1.3 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 2 5275 Viridiplantae
Brara.H02564.1.p B. rapa FPsc v1.3 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 2 5275 Viridiplantae
Bostr.23794s0369.1.p B. stricta v1.2 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Cre06.g307450.t1.2 C. reinhardtii v5.6 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Medtr8g106170.4 M. truncatula Mt4.0v1 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
SapurV1A.0404s0240.1.p S. purpurea v1.0 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00029.89 A. trichopoda v1.0 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Traes_3B_3AAD70DFB.1 T. aestivum v2.2 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Eucgr.J00854.1.p E. grandis v2.0 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
Prupe.1G077400.1.p P. persica v2.1 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 1 5275 Viridiplantae
GSMUA_Achr9P12650_001 M. acuminata v1 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 2 5275 Viridiplantae
GSMUA_Achr3P03970_001 M. acuminata v1 123425409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein 2 5275 Viridiplantae