Gene : AT1G14650 A. thaliana TAIR10
Defline:  (1 of 2) PTHR15316//PTHR15316:SF1 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED // SPLICING FACTOR 3A SUBUNIT 1 Genomic Order:  1465
Name:  ? AT1G14650 Secondary Identifier:  ? PAC:19652767
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G14650 0.5kb upstream 0.5kb upstream 4618 true Chr1: 5027162-5031779 Arabidopsis thaliana
AT1G14650 0.5kb upstream 0.5kb upstream 500 false Chr1: 5027162-5027661 Arabidopsis thaliana
AT1G14650 0.5kb downstream 0.5kb downstream 4618 true Chr1: 5027662-5032279 Arabidopsis thaliana
AT1G14650 0.5kb downstream 0.5kb downstream 500 false Chr1: 5031780-5032279 Arabidopsis thaliana
AT1G14650 1.0kb upstream 1.0kb upstream 5118 true Chr1: 5026662-5031779 Arabidopsis thaliana
AT1G14650 1.0kb upstream 1.0kb upstream 1000 false Chr1: 5026662-5027661 Arabidopsis thaliana
AT1G14650 1.0kb downstream 1.0kb downstream 5118 true Chr1: 5027662-5032779 Arabidopsis thaliana
AT1G14650 1.0kb downstream 1.0kb downstream 1000 false Chr1: 5031780-5032779 Arabidopsis thaliana
AT1G14650 2.0kb upstream 2.0kb upstream 6118 true Chr1: 5025662-5031779 Arabidopsis thaliana
AT1G14650 2.0kb upstream 2.0kb upstream 2000 false Chr1: 5025662-5027661 Arabidopsis thaliana
AT1G14650 2.0kb downstream 2.0kb downstream 6118 true Chr1: 5027662-5033779 Arabidopsis thaliana
AT1G14650 2.0kb downstream 2.0kb downstream 2000 false Chr1: 5031780-5033779 Arabidopsis thaliana
AT1G14650 5.0kb upstream 5.0kb upstream 9118 true Chr1: 5022662-5031779 Arabidopsis thaliana
AT1G14650 5.0kb upstream 5.0kb upstream 5000 false Chr1: 5022662-5027661 Arabidopsis thaliana
AT1G14650 5.0kb downstream 5.0kb downstream 9118 true Chr1: 5027662-5036779 Arabidopsis thaliana
AT1G14650 5.0kb downstream 5.0kb downstream 5000 false Chr1: 5031780-5036779 Arabidopsis thaliana
AT1G14650 10.0kb upstream 10.0kb upstream 14118 true Chr1: 5017662-5031779 Arabidopsis thaliana
AT1G14650 10.0kb upstream 10.0kb upstream 10000 false Chr1: 5017662-5027661 Arabidopsis thaliana
AT1G14650 10.0kb downstream 10.0kb downstream 14118 true Chr1: 5027662-5041779 Arabidopsis thaliana
AT1G14650 10.0kb downstream 10.0kb downstream 10000 false Chr1: 5031780-5041779 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041332 5273 Angiosperm View MSA
122364426 5261 Brassicaceae View MSA
123840698 5264 Brassicales-Malvales View MSA
124342903 5266 SBM View MSA
124237111 5268 Malvidae View MSA
124066763 5270 Rosid View MSA
123748218 5271 Pentapetalae View MSA
122792189 5272 Eudicot View MSA
121344762 5274 Embryophyte View MSA
123425409 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.566       Low
cufflinks 15.471        
cufflinks 9.322        
cufflinks 17.468       High
cufflinks 8.858        
cufflinks 14.077        

0 Strain