Gene : Cucsa.084820 C. sativus v1.0
Defline:  (1 of 2) PTHR13268:SF2 - AUTOPHAGY-RELATED PROTEIN 18G Genomic Order:  63
Name:  ? Cucsa.084820 Secondary Identifier:  ? PAC:16956599
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.084820 0.5kb upstream 0.5kb upstream 7858 true scaffold00862: 477025-484882 Cucumis sativus
Cucsa.084820 0.5kb upstream 0.5kb upstream 500 false scaffold00862: 484383-484882 Cucumis sativus
Cucsa.084820 0.5kb downstream 0.5kb downstream 7858 true scaffold00862: 476525-484382 Cucumis sativus
Cucsa.084820 0.5kb downstream 0.5kb downstream 500 false scaffold00862: 476525-477024 Cucumis sativus
Cucsa.084820 1.0kb upstream 1.0kb upstream 8358 true scaffold00862: 477025-485382 Cucumis sativus
Cucsa.084820 1.0kb upstream 1.0kb upstream 1000 false scaffold00862: 484383-485382 Cucumis sativus
Cucsa.084820 1.0kb downstream 1.0kb downstream 8358 true scaffold00862: 476025-484382 Cucumis sativus
Cucsa.084820 1.0kb downstream 1.0kb downstream 1000 false scaffold00862: 476025-477024 Cucumis sativus
Cucsa.084820 2.0kb upstream 2.0kb upstream 9358 true scaffold00862: 477025-486382 Cucumis sativus
Cucsa.084820 2.0kb upstream 2.0kb upstream 2000 false scaffold00862: 484383-486382 Cucumis sativus
Cucsa.084820 2.0kb downstream 2.0kb downstream 9358 true scaffold00862: 475025-484382 Cucumis sativus
Cucsa.084820 2.0kb downstream 2.0kb downstream 2000 false scaffold00862: 475025-477024 Cucumis sativus
Cucsa.084820 5.0kb upstream 5.0kb upstream 12358 true scaffold00862: 477025-489382 Cucumis sativus
Cucsa.084820 5.0kb upstream 5.0kb upstream 5000 false scaffold00862: 484383-489382 Cucumis sativus
Cucsa.084820 5.0kb downstream 5.0kb downstream 12358 true scaffold00862: 472025-484382 Cucumis sativus
Cucsa.084820 5.0kb downstream 5.0kb downstream 5000 false scaffold00862: 472025-477024 Cucumis sativus
Cucsa.084820 10.0kb upstream 10.0kb upstream 17358 true scaffold00862: 477025-494382 Cucumis sativus
Cucsa.084820 10.0kb upstream 10.0kb upstream 10000 false scaffold00862: 484383-494382 Cucumis sativus
Cucsa.084820 10.0kb downstream 10.0kb downstream 17358 true scaffold00862: 467025-484382 Cucumis sativus
Cucsa.084820 10.0kb downstream 10.0kb downstream 10000 false scaffold00862: 467025-477024 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305395 5265 Fabidae View MSA
124066220 5270 Rosid View MSA
123744735 5271 Pentapetalae View MSA
122790134 5272 Eudicot View MSA
122047922 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain