Gene : Cucsa.084960 C. sativus v1.0
Defline:  (1 of 2) PTHR11592:SF17 - GLUTATHIONE PEROXIDASE 4-RELATED Genomic Order:  77
Name:  ? Cucsa.084960 Secondary Identifier:  ? PAC:16956616
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus DETOX1-PWY-1 Cucumis sativus pathologic  
Csativus PWY-4081 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.084960 0.5kb upstream 0.5kb upstream 3605 true scaffold00862: 636610-640214 Cucumis sativus
Cucsa.084960 0.5kb upstream 0.5kb upstream 500 false scaffold00862: 636610-637109 Cucumis sativus
Cucsa.084960 0.5kb downstream 0.5kb downstream 3605 true scaffold00862: 637110-640714 Cucumis sativus
Cucsa.084960 0.5kb downstream 0.5kb downstream 500 false scaffold00862: 640215-640714 Cucumis sativus
Cucsa.084960 1.0kb upstream 1.0kb upstream 4105 true scaffold00862: 636110-640214 Cucumis sativus
Cucsa.084960 1.0kb upstream 1.0kb upstream 1000 false scaffold00862: 636110-637109 Cucumis sativus
Cucsa.084960 1.0kb downstream 1.0kb downstream 4105 true scaffold00862: 637110-641214 Cucumis sativus
Cucsa.084960 1.0kb downstream 1.0kb downstream 1000 false scaffold00862: 640215-641214 Cucumis sativus
Cucsa.084960 2.0kb upstream 2.0kb upstream 5105 true scaffold00862: 635110-640214 Cucumis sativus
Cucsa.084960 2.0kb upstream 2.0kb upstream 2000 false scaffold00862: 635110-637109 Cucumis sativus
Cucsa.084960 2.0kb downstream 2.0kb downstream 5105 true scaffold00862: 637110-642214 Cucumis sativus
Cucsa.084960 2.0kb downstream 2.0kb downstream 2000 false scaffold00862: 640215-642214 Cucumis sativus
Cucsa.084960 5.0kb upstream 5.0kb upstream 8105 true scaffold00862: 632110-640214 Cucumis sativus
Cucsa.084960 5.0kb upstream 5.0kb upstream 5000 false scaffold00862: 632110-637109 Cucumis sativus
Cucsa.084960 5.0kb downstream 5.0kb downstream 8105 true scaffold00862: 637110-645214 Cucumis sativus
Cucsa.084960 5.0kb downstream 5.0kb downstream 5000 false scaffold00862: 640215-645214 Cucumis sativus
Cucsa.084960 10.0kb upstream 10.0kb upstream 13105 true scaffold00862: 627110-640214 Cucumis sativus
Cucsa.084960 10.0kb upstream 10.0kb upstream 10000 false scaffold00862: 627110-637109 Cucumis sativus
Cucsa.084960 10.0kb downstream 10.0kb downstream 13105 true scaffold00862: 637110-650214 Cucumis sativus
Cucsa.084960 10.0kb downstream 10.0kb downstream 10000 false scaffold00862: 640215-650214 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121602393 5273 Angiosperm Singleton cluster - no MSA
122232635 5265 Fabidae Singleton cluster - no MSA
123978868 5270 Rosid Singleton cluster - no MSA
123554545 5271 Pentapetalae Singleton cluster - no MSA
122589359 5272 Eudicot Singleton cluster - no MSA
120874684 5274 Embryophyte Singleton cluster - no MSA
122915575 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain