Gene : Cucsa.084550 C. sativus v1.0
Defline:  (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  36
Name:  ? Cucsa.084550 Secondary Identifier:  ? PAC:16956551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.084550 0.5kb upstream 0.5kb upstream 3421 true scaffold00862: 275007-278427 Cucumis sativus
Cucsa.084550 0.5kb upstream 0.5kb upstream 500 false scaffold00862: 275007-275506 Cucumis sativus
Cucsa.084550 0.5kb downstream 0.5kb downstream 3421 true scaffold00862: 275507-278927 Cucumis sativus
Cucsa.084550 0.5kb downstream 0.5kb downstream 500 false scaffold00862: 278428-278927 Cucumis sativus
Cucsa.084550 1.0kb upstream 1.0kb upstream 3921 true scaffold00862: 274507-278427 Cucumis sativus
Cucsa.084550 1.0kb upstream 1.0kb upstream 1000 false scaffold00862: 274507-275506 Cucumis sativus
Cucsa.084550 1.0kb downstream 1.0kb downstream 3921 true scaffold00862: 275507-279427 Cucumis sativus
Cucsa.084550 1.0kb downstream 1.0kb downstream 1000 false scaffold00862: 278428-279427 Cucumis sativus
Cucsa.084550 2.0kb upstream 2.0kb upstream 4921 true scaffold00862: 273507-278427 Cucumis sativus
Cucsa.084550 2.0kb upstream 2.0kb upstream 2000 false scaffold00862: 273507-275506 Cucumis sativus
Cucsa.084550 2.0kb downstream 2.0kb downstream 4921 true scaffold00862: 275507-280427 Cucumis sativus
Cucsa.084550 2.0kb downstream 2.0kb downstream 2000 false scaffold00862: 278428-280427 Cucumis sativus
Cucsa.084550 5.0kb upstream 5.0kb upstream 7921 true scaffold00862: 270507-278427 Cucumis sativus
Cucsa.084550 5.0kb upstream 5.0kb upstream 5000 false scaffold00862: 270507-275506 Cucumis sativus
Cucsa.084550 5.0kb downstream 5.0kb downstream 7921 true scaffold00862: 275507-283427 Cucumis sativus
Cucsa.084550 5.0kb downstream 5.0kb downstream 5000 false scaffold00862: 278428-283427 Cucumis sativus
Cucsa.084550 10.0kb upstream 10.0kb upstream 12921 true scaffold00862: 265507-278427 Cucumis sativus
Cucsa.084550 10.0kb upstream 10.0kb upstream 10000 false scaffold00862: 265507-275506 Cucumis sativus
Cucsa.084550 10.0kb downstream 10.0kb downstream 12921 true scaffold00862: 275507-288427 Cucumis sativus
Cucsa.084550 10.0kb downstream 10.0kb downstream 10000 false scaffold00862: 278428-288427 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302790 5265 Fabidae View MSA
124062477 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain