Gene : Cucsa.050780 C. sativus v1.0
Defline:  (1 of 1) PTHR13833:SF49 - NHL REPEAT-CONTAINING PROTEIN 2 Genomic Order:  1
Name:  ? Cucsa.050780 Secondary Identifier:  ? PAC:16954115
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.050780 0.5kb upstream 0.5kb upstream 16636 true scaffold00557: 3000-19635 Cucumis sativus
Cucsa.050780 0.5kb upstream 0.5kb upstream 500 false scaffold00557: 3000-3499 Cucumis sativus
Cucsa.050780 0.5kb downstream 0.5kb downstream 16636 true scaffold00557: 3500-20135 Cucumis sativus
Cucsa.050780 0.5kb downstream 0.5kb downstream 500 false scaffold00557: 19636-20135 Cucumis sativus
Cucsa.050780 1.0kb upstream 1.0kb upstream 17136 true scaffold00557: 2500-19635 Cucumis sativus
Cucsa.050780 1.0kb upstream 1.0kb upstream 1000 false scaffold00557: 2500-3499 Cucumis sativus
Cucsa.050780 1.0kb downstream 1.0kb downstream 17136 true scaffold00557: 3500-20635 Cucumis sativus
Cucsa.050780 1.0kb downstream 1.0kb downstream 1000 false scaffold00557: 19636-20635 Cucumis sativus
Cucsa.050780 2.0kb upstream 2.0kb upstream 18136 true scaffold00557: 1500-19635 Cucumis sativus
Cucsa.050780 2.0kb upstream 2.0kb upstream 2000 false scaffold00557: 1500-3499 Cucumis sativus
Cucsa.050780 2.0kb downstream 2.0kb downstream 18136 true scaffold00557: 3500-21635 Cucumis sativus
Cucsa.050780 2.0kb downstream 2.0kb downstream 2000 false scaffold00557: 19636-21635 Cucumis sativus
Cucsa.050780 5.0kb upstream 5.0kb upstream 19635 true scaffold00557: 1-19635 Cucumis sativus
Cucsa.050780 5.0kb upstream 5.0kb upstream 3499 false scaffold00557: 1-3499 Cucumis sativus
Cucsa.050780 5.0kb downstream 5.0kb downstream 21136 true scaffold00557: 3500-24635 Cucumis sativus
Cucsa.050780 5.0kb downstream 5.0kb downstream 5000 false scaffold00557: 19636-24635 Cucumis sativus
Cucsa.050780 10.0kb upstream 10.0kb upstream 19635 true scaffold00557: 1-19635 Cucumis sativus
Cucsa.050780 10.0kb upstream 10.0kb upstream 3499 false scaffold00557: 1-3499 Cucumis sativus
Cucsa.050780 10.0kb downstream 10.0kb downstream 26136 true scaffold00557: 3500-29635 Cucumis sativus
Cucsa.050780 10.0kb downstream 10.0kb downstream 10000 false scaffold00557: 19636-29635 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307944 5265 Fabidae View MSA
124061821 5270 Rosid View MSA
123738220 5271 Pentapetalae View MSA
122791957 5272 Eudicot View MSA
122045545 5273 Angiosperm View MSA
121344025 5274 Embryophyte View MSA
123424859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain