Gene : Cucsa.050580 C. sativus v1.0
Defline:  (1 of 20) PF16845 - Aspartic acid proteinase inhibitor (SQAPI) Genomic Order:  11
Name:  ? Cucsa.050580 Secondary Identifier:  ? PAC:16954114
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.050580 0.5kb upstream 0.5kb upstream 973 true scaffold00555: 231506-232478 Cucumis sativus
Cucsa.050580 0.5kb upstream 0.5kb upstream 500 false scaffold00555: 231979-232478 Cucumis sativus
Cucsa.050580 0.5kb downstream 0.5kb downstream 973 true scaffold00555: 231006-231978 Cucumis sativus
Cucsa.050580 0.5kb downstream 0.5kb downstream 500 false scaffold00555: 231006-231505 Cucumis sativus
Cucsa.050580 1.0kb upstream 1.0kb upstream 1473 true scaffold00555: 231506-232978 Cucumis sativus
Cucsa.050580 1.0kb upstream 1.0kb upstream 1000 false scaffold00555: 231979-232978 Cucumis sativus
Cucsa.050580 1.0kb downstream 1.0kb downstream 1473 true scaffold00555: 230506-231978 Cucumis sativus
Cucsa.050580 1.0kb downstream 1.0kb downstream 1000 false scaffold00555: 230506-231505 Cucumis sativus
Cucsa.050580 2.0kb upstream 2.0kb upstream 2473 true scaffold00555: 231506-233978 Cucumis sativus
Cucsa.050580 2.0kb upstream 2.0kb upstream 2000 false scaffold00555: 231979-233978 Cucumis sativus
Cucsa.050580 2.0kb downstream 2.0kb downstream 2473 true scaffold00555: 229506-231978 Cucumis sativus
Cucsa.050580 2.0kb downstream 2.0kb downstream 2000 false scaffold00555: 229506-231505 Cucumis sativus
Cucsa.050580 5.0kb upstream 5.0kb upstream 5473 true scaffold00555: 231506-236978 Cucumis sativus
Cucsa.050580 5.0kb upstream 5.0kb upstream 5000 false scaffold00555: 231979-236978 Cucumis sativus
Cucsa.050580 5.0kb downstream 5.0kb downstream 5473 true scaffold00555: 226506-231978 Cucumis sativus
Cucsa.050580 5.0kb downstream 5.0kb downstream 5000 false scaffold00555: 226506-231505 Cucumis sativus
Cucsa.050580 10.0kb upstream 10.0kb upstream 6927 true scaffold00555: 231506-238432 Cucumis sativus
Cucsa.050580 10.0kb upstream 10.0kb upstream 6454 false scaffold00555: 231979-238432 Cucumis sativus
Cucsa.050580 10.0kb downstream 10.0kb downstream 10473 true scaffold00555: 221506-231978 Cucumis sativus
Cucsa.050580 10.0kb downstream 10.0kb downstream 10000 false scaffold00555: 221506-231505 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606597 5273 Angiosperm View MSA
122236867 5265 Fabidae View MSA
123983077 5270 Rosid View MSA
123558751 5271 Pentapetalae View MSA
122593565 5272 Eudicot View MSA
120878887 5274 Embryophyte View MSA
122919776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain