Gene : Cucsa.048430 C. sativus v1.0
Defline:  (1 of 24) 1.3.3.8 - Tetrahydroberberine oxidase / THB oxidase Genomic Order:  538
Name:  ? Cucsa.048430 Secondary Identifier:  ? PAC:16953863
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.048430 0.5kb upstream 0.5kb upstream 2110 true scaffold00542: 3167435-3169544 Cucumis sativus
Cucsa.048430 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 3169045-3169544 Cucumis sativus
Cucsa.048430 0.5kb downstream 0.5kb downstream 2110 true scaffold00542: 3166935-3169044 Cucumis sativus
Cucsa.048430 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 3166935-3167434 Cucumis sativus
Cucsa.048430 1.0kb upstream 1.0kb upstream 2610 true scaffold00542: 3167435-3170044 Cucumis sativus
Cucsa.048430 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 3169045-3170044 Cucumis sativus
Cucsa.048430 1.0kb downstream 1.0kb downstream 2610 true scaffold00542: 3166435-3169044 Cucumis sativus
Cucsa.048430 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 3166435-3167434 Cucumis sativus
Cucsa.048430 2.0kb upstream 2.0kb upstream 3610 true scaffold00542: 3167435-3171044 Cucumis sativus
Cucsa.048430 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 3169045-3171044 Cucumis sativus
Cucsa.048430 2.0kb downstream 2.0kb downstream 3610 true scaffold00542: 3165435-3169044 Cucumis sativus
Cucsa.048430 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 3165435-3167434 Cucumis sativus
Cucsa.048430 5.0kb upstream 5.0kb upstream 6610 true scaffold00542: 3167435-3174044 Cucumis sativus
Cucsa.048430 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 3169045-3174044 Cucumis sativus
Cucsa.048430 5.0kb downstream 5.0kb downstream 6610 true scaffold00542: 3162435-3169044 Cucumis sativus
Cucsa.048430 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 3162435-3167434 Cucumis sativus
Cucsa.048430 10.0kb upstream 10.0kb upstream 11610 true scaffold00542: 3167435-3179044 Cucumis sativus
Cucsa.048430 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 3169045-3179044 Cucumis sativus
Cucsa.048430 10.0kb downstream 10.0kb downstream 11610 true scaffold00542: 3157435-3169044 Cucumis sativus
Cucsa.048430 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 3157435-3167434 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302697 5265 Fabidae View MSA
124070066 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain