Gene : Cucsa.048470 C. sativus v1.0
Defline:  (1 of 24) 1.3.3.8 - Tetrahydroberberine oxidase / THB oxidase Genomic Order:  542
Name:  ? Cucsa.048470 Secondary Identifier:  ? PAC:16953867
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.048470 0.5kb upstream 0.5kb upstream 1991 true scaffold00542: 3179258-3181248 Cucumis sativus
Cucsa.048470 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 3180749-3181248 Cucumis sativus
Cucsa.048470 0.5kb downstream 0.5kb downstream 1991 true scaffold00542: 3178758-3180748 Cucumis sativus
Cucsa.048470 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 3178758-3179257 Cucumis sativus
Cucsa.048470 1.0kb upstream 1.0kb upstream 2491 true scaffold00542: 3179258-3181748 Cucumis sativus
Cucsa.048470 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 3180749-3181748 Cucumis sativus
Cucsa.048470 1.0kb downstream 1.0kb downstream 2491 true scaffold00542: 3178258-3180748 Cucumis sativus
Cucsa.048470 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 3178258-3179257 Cucumis sativus
Cucsa.048470 2.0kb upstream 2.0kb upstream 3491 true scaffold00542: 3179258-3182748 Cucumis sativus
Cucsa.048470 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 3180749-3182748 Cucumis sativus
Cucsa.048470 2.0kb downstream 2.0kb downstream 3491 true scaffold00542: 3177258-3180748 Cucumis sativus
Cucsa.048470 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 3177258-3179257 Cucumis sativus
Cucsa.048470 5.0kb upstream 5.0kb upstream 6491 true scaffold00542: 3179258-3185748 Cucumis sativus
Cucsa.048470 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 3180749-3185748 Cucumis sativus
Cucsa.048470 5.0kb downstream 5.0kb downstream 6491 true scaffold00542: 3174258-3180748 Cucumis sativus
Cucsa.048470 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 3174258-3179257 Cucumis sativus
Cucsa.048470 10.0kb upstream 10.0kb upstream 11491 true scaffold00542: 3179258-3190748 Cucumis sativus
Cucsa.048470 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 3180749-3190748 Cucumis sativus
Cucsa.048470 10.0kb downstream 10.0kb downstream 11491 true scaffold00542: 3169258-3180748 Cucumis sativus
Cucsa.048470 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 3169258-3179257 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312484 5265 Fabidae View MSA
124073888 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain