Gene : Cucsa.048480 C. sativus v1.0
Defline:  (1 of 24) 1.3.3.8 - Tetrahydroberberine oxidase / THB oxidase Genomic Order:  543
Name:  ? Cucsa.048480 Secondary Identifier:  ? PAC:16953868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.048480 0.5kb upstream 0.5kb upstream 2078 true scaffold00542: 3182085-3184162 Cucumis sativus
Cucsa.048480 0.5kb upstream 0.5kb upstream 500 false scaffold00542: 3183663-3184162 Cucumis sativus
Cucsa.048480 0.5kb downstream 0.5kb downstream 2078 true scaffold00542: 3181585-3183662 Cucumis sativus
Cucsa.048480 0.5kb downstream 0.5kb downstream 500 false scaffold00542: 3181585-3182084 Cucumis sativus
Cucsa.048480 1.0kb upstream 1.0kb upstream 2578 true scaffold00542: 3182085-3184662 Cucumis sativus
Cucsa.048480 1.0kb upstream 1.0kb upstream 1000 false scaffold00542: 3183663-3184662 Cucumis sativus
Cucsa.048480 1.0kb downstream 1.0kb downstream 2578 true scaffold00542: 3181085-3183662 Cucumis sativus
Cucsa.048480 1.0kb downstream 1.0kb downstream 1000 false scaffold00542: 3181085-3182084 Cucumis sativus
Cucsa.048480 2.0kb upstream 2.0kb upstream 3578 true scaffold00542: 3182085-3185662 Cucumis sativus
Cucsa.048480 2.0kb upstream 2.0kb upstream 2000 false scaffold00542: 3183663-3185662 Cucumis sativus
Cucsa.048480 2.0kb downstream 2.0kb downstream 3578 true scaffold00542: 3180085-3183662 Cucumis sativus
Cucsa.048480 2.0kb downstream 2.0kb downstream 2000 false scaffold00542: 3180085-3182084 Cucumis sativus
Cucsa.048480 5.0kb upstream 5.0kb upstream 6578 true scaffold00542: 3182085-3188662 Cucumis sativus
Cucsa.048480 5.0kb upstream 5.0kb upstream 5000 false scaffold00542: 3183663-3188662 Cucumis sativus
Cucsa.048480 5.0kb downstream 5.0kb downstream 6578 true scaffold00542: 3177085-3183662 Cucumis sativus
Cucsa.048480 5.0kb downstream 5.0kb downstream 5000 false scaffold00542: 3177085-3182084 Cucumis sativus
Cucsa.048480 10.0kb upstream 10.0kb upstream 11578 true scaffold00542: 3182085-3193662 Cucumis sativus
Cucsa.048480 10.0kb upstream 10.0kb upstream 10000 false scaffold00542: 3183663-3193662 Cucumis sativus
Cucsa.048480 10.0kb downstream 10.0kb downstream 11578 true scaffold00542: 3172085-3183662 Cucumis sativus
Cucsa.048480 10.0kb downstream 10.0kb downstream 10000 false scaffold00542: 3172085-3182084 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312484 5265 Fabidae View MSA
124073888 5270 Rosid View MSA
123750008 5271 Pentapetalae View MSA
122797707 5272 Eudicot View MSA
122049918 5273 Angiosperm View MSA
121351151 5274 Embryophyte View MSA
123426970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain