Gene : Cucsa.052640 C. sativus v1.0
Defline:  (1 of 1) PTHR21022:SF1 - AROGENATE DEHYDRATASE/PREPHENATE DEHYDRATASE 2, CHLOROPLASTIC Genomic Order:  8
Name:  ? Cucsa.052640 Secondary Identifier:  ? PAC:16954258
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-3462 Cucumis sativus pathologic  
Csativus PWY-3481 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.052640 0.5kb upstream 0.5kb upstream 4216 true scaffold00577: 117606-121821 Cucumis sativus
Cucsa.052640 0.5kb upstream 0.5kb upstream 500 false scaffold00577: 121322-121821 Cucumis sativus
Cucsa.052640 0.5kb downstream 0.5kb downstream 4216 true scaffold00577: 117106-121321 Cucumis sativus
Cucsa.052640 0.5kb downstream 0.5kb downstream 500 false scaffold00577: 117106-117605 Cucumis sativus
Cucsa.052640 1.0kb upstream 1.0kb upstream 4716 true scaffold00577: 117606-122321 Cucumis sativus
Cucsa.052640 1.0kb upstream 1.0kb upstream 1000 false scaffold00577: 121322-122321 Cucumis sativus
Cucsa.052640 1.0kb downstream 1.0kb downstream 4716 true scaffold00577: 116606-121321 Cucumis sativus
Cucsa.052640 1.0kb downstream 1.0kb downstream 1000 false scaffold00577: 116606-117605 Cucumis sativus
Cucsa.052640 2.0kb upstream 2.0kb upstream 5716 true scaffold00577: 117606-123321 Cucumis sativus
Cucsa.052640 2.0kb upstream 2.0kb upstream 2000 false scaffold00577: 121322-123321 Cucumis sativus
Cucsa.052640 2.0kb downstream 2.0kb downstream 5716 true scaffold00577: 115606-121321 Cucumis sativus
Cucsa.052640 2.0kb downstream 2.0kb downstream 2000 false scaffold00577: 115606-117605 Cucumis sativus
Cucsa.052640 5.0kb upstream 5.0kb upstream 8716 true scaffold00577: 117606-126321 Cucumis sativus
Cucsa.052640 5.0kb upstream 5.0kb upstream 5000 false scaffold00577: 121322-126321 Cucumis sativus
Cucsa.052640 5.0kb downstream 5.0kb downstream 8716 true scaffold00577: 112606-121321 Cucumis sativus
Cucsa.052640 5.0kb downstream 5.0kb downstream 5000 false scaffold00577: 112606-117605 Cucumis sativus
Cucsa.052640 10.0kb upstream 10.0kb upstream 13716 true scaffold00577: 117606-131321 Cucumis sativus
Cucsa.052640 10.0kb upstream 10.0kb upstream 10000 false scaffold00577: 121322-131321 Cucumis sativus
Cucsa.052640 10.0kb downstream 10.0kb downstream 13716 true scaffold00577: 107606-121321 Cucumis sativus
Cucsa.052640 10.0kb downstream 10.0kb downstream 10000 false scaffold00577: 107606-117605 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040982 5273 Angiosperm View MSA
122308672 5265 Fabidae View MSA
124068045 5270 Rosid View MSA
123737852 5271 Pentapetalae View MSA
122798804 5272 Eudicot View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain