Gene : Cucsa.088480 C. sativus v1.0
Defline:  (1 of 1) PTHR12526:SF358 - SUCROSE-PHOSPHATE SYNTHASE 4-RELATED Genomic Order:  101
Name:  ? Cucsa.088480 Secondary Identifier:  ? PAC:16957013
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7238 Cucumis sativus pathologic  
Csativus SUCSYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.088480 0.5kb upstream 0.5kb upstream 7136 true scaffold00888: 768834-775969 Cucumis sativus
Cucsa.088480 0.5kb upstream 0.5kb upstream 500 false scaffold00888: 775470-775969 Cucumis sativus
Cucsa.088480 0.5kb downstream 0.5kb downstream 7136 true scaffold00888: 768334-775469 Cucumis sativus
Cucsa.088480 0.5kb downstream 0.5kb downstream 500 false scaffold00888: 768334-768833 Cucumis sativus
Cucsa.088480 1.0kb upstream 1.0kb upstream 7636 true scaffold00888: 768834-776469 Cucumis sativus
Cucsa.088480 1.0kb upstream 1.0kb upstream 1000 false scaffold00888: 775470-776469 Cucumis sativus
Cucsa.088480 1.0kb downstream 1.0kb downstream 7636 true scaffold00888: 767834-775469 Cucumis sativus
Cucsa.088480 1.0kb downstream 1.0kb downstream 1000 false scaffold00888: 767834-768833 Cucumis sativus
Cucsa.088480 2.0kb upstream 2.0kb upstream 8636 true scaffold00888: 768834-777469 Cucumis sativus
Cucsa.088480 2.0kb upstream 2.0kb upstream 2000 false scaffold00888: 775470-777469 Cucumis sativus
Cucsa.088480 2.0kb downstream 2.0kb downstream 8636 true scaffold00888: 766834-775469 Cucumis sativus
Cucsa.088480 2.0kb downstream 2.0kb downstream 2000 false scaffold00888: 766834-768833 Cucumis sativus
Cucsa.088480 5.0kb upstream 5.0kb upstream 11636 true scaffold00888: 768834-780469 Cucumis sativus
Cucsa.088480 5.0kb upstream 5.0kb upstream 5000 false scaffold00888: 775470-780469 Cucumis sativus
Cucsa.088480 5.0kb downstream 5.0kb downstream 11636 true scaffold00888: 763834-775469 Cucumis sativus
Cucsa.088480 5.0kb downstream 5.0kb downstream 5000 false scaffold00888: 763834-768833 Cucumis sativus
Cucsa.088480 10.0kb upstream 10.0kb upstream 16636 true scaffold00888: 768834-785469 Cucumis sativus
Cucsa.088480 10.0kb upstream 10.0kb upstream 10000 false scaffold00888: 775470-785469 Cucumis sativus
Cucsa.088480 10.0kb downstream 10.0kb downstream 16636 true scaffold00888: 758834-775469 Cucumis sativus
Cucsa.088480 10.0kb downstream 10.0kb downstream 10000 false scaffold00888: 758834-768833 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308554 5265 Fabidae View MSA
124060943 5270 Rosid View MSA
123740520 5271 Pentapetalae View MSA
122786711 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain