Gene : Cucsa.088250 C. sativus v1.0
Defline:  (1 of 2) PTHR22952:SF180 - TRANSCRIPTION FACTOR TGA1-RELATED Genomic Order:  78
Name:  ? Cucsa.088250 Secondary Identifier:  ? PAC:16956975
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.088250 0.5kb upstream 0.5kb upstream 4242 true scaffold00888: 632855-637096 Cucumis sativus
Cucsa.088250 0.5kb upstream 0.5kb upstream 500 false scaffold00888: 632855-633354 Cucumis sativus
Cucsa.088250 0.5kb downstream 0.5kb downstream 4242 true scaffold00888: 633355-637596 Cucumis sativus
Cucsa.088250 0.5kb downstream 0.5kb downstream 500 false scaffold00888: 637097-637596 Cucumis sativus
Cucsa.088250 1.0kb upstream 1.0kb upstream 4742 true scaffold00888: 632355-637096 Cucumis sativus
Cucsa.088250 1.0kb upstream 1.0kb upstream 1000 false scaffold00888: 632355-633354 Cucumis sativus
Cucsa.088250 1.0kb downstream 1.0kb downstream 4742 true scaffold00888: 633355-638096 Cucumis sativus
Cucsa.088250 1.0kb downstream 1.0kb downstream 1000 false scaffold00888: 637097-638096 Cucumis sativus
Cucsa.088250 2.0kb upstream 2.0kb upstream 5742 true scaffold00888: 631355-637096 Cucumis sativus
Cucsa.088250 2.0kb upstream 2.0kb upstream 2000 false scaffold00888: 631355-633354 Cucumis sativus
Cucsa.088250 2.0kb downstream 2.0kb downstream 5742 true scaffold00888: 633355-639096 Cucumis sativus
Cucsa.088250 2.0kb downstream 2.0kb downstream 2000 false scaffold00888: 637097-639096 Cucumis sativus
Cucsa.088250 5.0kb upstream 5.0kb upstream 8742 true scaffold00888: 628355-637096 Cucumis sativus
Cucsa.088250 5.0kb upstream 5.0kb upstream 5000 false scaffold00888: 628355-633354 Cucumis sativus
Cucsa.088250 5.0kb downstream 5.0kb downstream 8742 true scaffold00888: 633355-642096 Cucumis sativus
Cucsa.088250 5.0kb downstream 5.0kb downstream 5000 false scaffold00888: 637097-642096 Cucumis sativus
Cucsa.088250 10.0kb upstream 10.0kb upstream 13742 true scaffold00888: 623355-637096 Cucumis sativus
Cucsa.088250 10.0kb upstream 10.0kb upstream 10000 false scaffold00888: 623355-633354 Cucumis sativus
Cucsa.088250 10.0kb downstream 10.0kb downstream 13742 true scaffold00888: 633355-647096 Cucumis sativus
Cucsa.088250 10.0kb downstream 10.0kb downstream 10000 false scaffold00888: 637097-647096 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237170 5265 Fabidae View MSA
124071998 5270 Rosid View MSA
123743683 5271 Pentapetalae View MSA
122792849 5272 Eudicot View MSA
122045464 5273 Angiosperm View MSA
121310452 5274 Embryophyte View MSA
123347930 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain