Gene : Cucsa.105970 C. sativus v1.0
Defline:  (1 of 1) PTHR31642:SF11 - SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE Genomic Order:  76
Name:  ? Cucsa.105970 Secondary Identifier:  ? PAC:16959400
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-361 Cucumis sativus pathologic  
Csativus PWY-6040 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.105970 0.5kb upstream 0.5kb upstream 4224 true scaffold00929: 405489-409712 Cucumis sativus
Cucsa.105970 0.5kb upstream 0.5kb upstream 500 false scaffold00929: 405489-405988 Cucumis sativus
Cucsa.105970 0.5kb downstream 0.5kb downstream 4224 true scaffold00929: 405989-410212 Cucumis sativus
Cucsa.105970 0.5kb downstream 0.5kb downstream 500 false scaffold00929: 409713-410212 Cucumis sativus
Cucsa.105970 1.0kb upstream 1.0kb upstream 4724 true scaffold00929: 404989-409712 Cucumis sativus
Cucsa.105970 1.0kb upstream 1.0kb upstream 1000 false scaffold00929: 404989-405988 Cucumis sativus
Cucsa.105970 1.0kb downstream 1.0kb downstream 4724 true scaffold00929: 405989-410712 Cucumis sativus
Cucsa.105970 1.0kb downstream 1.0kb downstream 1000 false scaffold00929: 409713-410712 Cucumis sativus
Cucsa.105970 2.0kb upstream 2.0kb upstream 5724 true scaffold00929: 403989-409712 Cucumis sativus
Cucsa.105970 2.0kb upstream 2.0kb upstream 2000 false scaffold00929: 403989-405988 Cucumis sativus
Cucsa.105970 2.0kb downstream 2.0kb downstream 5724 true scaffold00929: 405989-411712 Cucumis sativus
Cucsa.105970 2.0kb downstream 2.0kb downstream 2000 false scaffold00929: 409713-411712 Cucumis sativus
Cucsa.105970 5.0kb upstream 5.0kb upstream 8724 true scaffold00929: 400989-409712 Cucumis sativus
Cucsa.105970 5.0kb upstream 5.0kb upstream 5000 false scaffold00929: 400989-405988 Cucumis sativus
Cucsa.105970 5.0kb downstream 5.0kb downstream 8724 true scaffold00929: 405989-414712 Cucumis sativus
Cucsa.105970 5.0kb downstream 5.0kb downstream 5000 false scaffold00929: 409713-414712 Cucumis sativus
Cucsa.105970 10.0kb upstream 10.0kb upstream 13724 true scaffold00929: 395989-409712 Cucumis sativus
Cucsa.105970 10.0kb upstream 10.0kb upstream 10000 false scaffold00929: 395989-405988 Cucumis sativus
Cucsa.105970 10.0kb downstream 10.0kb downstream 13724 true scaffold00929: 405989-419712 Cucumis sativus
Cucsa.105970 10.0kb downstream 10.0kb downstream 10000 false scaffold00929: 409713-419712 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312408 5265 Fabidae View MSA
124074856 5270 Rosid View MSA
123753544 5271 Pentapetalae View MSA
122797119 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain