Gene : Cucsa.112440 C. sativus v1.0
Defline:  (1 of 2) PTHR10351 - TRANSCRIPTION FACTOR BTF3 Genomic Order:  132
Name:  ? Cucsa.112440 Secondary Identifier:  ? PAC:16960176
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.112440 0.5kb upstream 0.5kb upstream 3235 true scaffold00953: 1017823-1021057 Cucumis sativus
Cucsa.112440 0.5kb upstream 0.5kb upstream 500 false scaffold00953: 1020558-1021057 Cucumis sativus
Cucsa.112440 0.5kb downstream 0.5kb downstream 3235 true scaffold00953: 1017323-1020557 Cucumis sativus
Cucsa.112440 0.5kb downstream 0.5kb downstream 500 false scaffold00953: 1017323-1017822 Cucumis sativus
Cucsa.112440 1.0kb upstream 1.0kb upstream 3735 true scaffold00953: 1017823-1021557 Cucumis sativus
Cucsa.112440 1.0kb upstream 1.0kb upstream 1000 false scaffold00953: 1020558-1021557 Cucumis sativus
Cucsa.112440 1.0kb downstream 1.0kb downstream 3735 true scaffold00953: 1016823-1020557 Cucumis sativus
Cucsa.112440 1.0kb downstream 1.0kb downstream 1000 false scaffold00953: 1016823-1017822 Cucumis sativus
Cucsa.112440 2.0kb upstream 2.0kb upstream 4735 true scaffold00953: 1017823-1022557 Cucumis sativus
Cucsa.112440 2.0kb upstream 2.0kb upstream 2000 false scaffold00953: 1020558-1022557 Cucumis sativus
Cucsa.112440 2.0kb downstream 2.0kb downstream 4735 true scaffold00953: 1015823-1020557 Cucumis sativus
Cucsa.112440 2.0kb downstream 2.0kb downstream 2000 false scaffold00953: 1015823-1017822 Cucumis sativus
Cucsa.112440 5.0kb upstream 5.0kb upstream 7735 true scaffold00953: 1017823-1025557 Cucumis sativus
Cucsa.112440 5.0kb upstream 5.0kb upstream 5000 false scaffold00953: 1020558-1025557 Cucumis sativus
Cucsa.112440 5.0kb downstream 5.0kb downstream 7735 true scaffold00953: 1012823-1020557 Cucumis sativus
Cucsa.112440 5.0kb downstream 5.0kb downstream 5000 false scaffold00953: 1012823-1017822 Cucumis sativus
Cucsa.112440 10.0kb upstream 10.0kb upstream 12735 true scaffold00953: 1017823-1030557 Cucumis sativus
Cucsa.112440 10.0kb upstream 10.0kb upstream 10000 false scaffold00953: 1020558-1030557 Cucumis sativus
Cucsa.112440 10.0kb downstream 10.0kb downstream 12735 true scaffold00953: 1007823-1020557 Cucumis sativus
Cucsa.112440 10.0kb downstream 10.0kb downstream 10000 false scaffold00953: 1007823-1017822 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121602835 5273 Angiosperm Singleton cluster - no MSA
122233080 5265 Fabidae Singleton cluster - no MSA
123979310 5270 Rosid Singleton cluster - no MSA
123554987 5271 Pentapetalae Singleton cluster - no MSA
122589801 5272 Eudicot Singleton cluster - no MSA
120875126 5274 Embryophyte Singleton cluster - no MSA
122916017 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain