Gene : Cucsa.105310 C. sativus v1.0
Defline:  (1 of 57) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  13
Name:  ? Cucsa.105310 Secondary Identifier:  ? PAC:16959316
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1081 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.105310 0.5kb upstream 0.5kb upstream 4936 true scaffold00929: 43035-47970 Cucumis sativus
Cucsa.105310 0.5kb upstream 0.5kb upstream 500 false scaffold00929: 43035-43534 Cucumis sativus
Cucsa.105310 0.5kb downstream 0.5kb downstream 4936 true scaffold00929: 43535-48470 Cucumis sativus
Cucsa.105310 0.5kb downstream 0.5kb downstream 500 false scaffold00929: 47971-48470 Cucumis sativus
Cucsa.105310 1.0kb upstream 1.0kb upstream 5436 true scaffold00929: 42535-47970 Cucumis sativus
Cucsa.105310 1.0kb upstream 1.0kb upstream 1000 false scaffold00929: 42535-43534 Cucumis sativus
Cucsa.105310 1.0kb downstream 1.0kb downstream 5436 true scaffold00929: 43535-48970 Cucumis sativus
Cucsa.105310 1.0kb downstream 1.0kb downstream 1000 false scaffold00929: 47971-48970 Cucumis sativus
Cucsa.105310 2.0kb upstream 2.0kb upstream 6436 true scaffold00929: 41535-47970 Cucumis sativus
Cucsa.105310 2.0kb upstream 2.0kb upstream 2000 false scaffold00929: 41535-43534 Cucumis sativus
Cucsa.105310 2.0kb downstream 2.0kb downstream 6436 true scaffold00929: 43535-49970 Cucumis sativus
Cucsa.105310 2.0kb downstream 2.0kb downstream 2000 false scaffold00929: 47971-49970 Cucumis sativus
Cucsa.105310 5.0kb upstream 5.0kb upstream 9436 true scaffold00929: 38535-47970 Cucumis sativus
Cucsa.105310 5.0kb upstream 5.0kb upstream 5000 false scaffold00929: 38535-43534 Cucumis sativus
Cucsa.105310 5.0kb downstream 5.0kb downstream 9436 true scaffold00929: 43535-52970 Cucumis sativus
Cucsa.105310 5.0kb downstream 5.0kb downstream 5000 false scaffold00929: 47971-52970 Cucumis sativus
Cucsa.105310 10.0kb upstream 10.0kb upstream 14436 true scaffold00929: 33535-47970 Cucumis sativus
Cucsa.105310 10.0kb upstream 10.0kb upstream 10000 false scaffold00929: 33535-43534 Cucumis sativus
Cucsa.105310 10.0kb downstream 10.0kb downstream 14436 true scaffold00929: 43535-57970 Cucumis sativus
Cucsa.105310 10.0kb downstream 10.0kb downstream 10000 false scaffold00929: 47971-57970 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306699 5265 Fabidae View MSA
124062237 5270 Rosid View MSA
123747899 5271 Pentapetalae View MSA
122789338 5272 Eudicot View MSA
122047278 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain