Gene : Cucsa.105510 C. sativus v1.0
Defline:  (1 of 1) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 Genomic Order:  33
Name:  ? Cucsa.105510 Secondary Identifier:  ? PAC:16959344
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.105510 0.5kb upstream 0.5kb upstream 12307 true scaffold00929: 148241-160547 Cucumis sativus
Cucsa.105510 0.5kb upstream 0.5kb upstream 500 false scaffold00929: 160048-160547 Cucumis sativus
Cucsa.105510 0.5kb downstream 0.5kb downstream 12307 true scaffold00929: 147741-160047 Cucumis sativus
Cucsa.105510 0.5kb downstream 0.5kb downstream 500 false scaffold00929: 147741-148240 Cucumis sativus
Cucsa.105510 1.0kb upstream 1.0kb upstream 12807 true scaffold00929: 148241-161047 Cucumis sativus
Cucsa.105510 1.0kb upstream 1.0kb upstream 1000 false scaffold00929: 160048-161047 Cucumis sativus
Cucsa.105510 1.0kb downstream 1.0kb downstream 12807 true scaffold00929: 147241-160047 Cucumis sativus
Cucsa.105510 1.0kb downstream 1.0kb downstream 1000 false scaffold00929: 147241-148240 Cucumis sativus
Cucsa.105510 2.0kb upstream 2.0kb upstream 13807 true scaffold00929: 148241-162047 Cucumis sativus
Cucsa.105510 2.0kb upstream 2.0kb upstream 2000 false scaffold00929: 160048-162047 Cucumis sativus
Cucsa.105510 2.0kb downstream 2.0kb downstream 13807 true scaffold00929: 146241-160047 Cucumis sativus
Cucsa.105510 2.0kb downstream 2.0kb downstream 2000 false scaffold00929: 146241-148240 Cucumis sativus
Cucsa.105510 5.0kb upstream 5.0kb upstream 16807 true scaffold00929: 148241-165047 Cucumis sativus
Cucsa.105510 5.0kb upstream 5.0kb upstream 5000 false scaffold00929: 160048-165047 Cucumis sativus
Cucsa.105510 5.0kb downstream 5.0kb downstream 16807 true scaffold00929: 143241-160047 Cucumis sativus
Cucsa.105510 5.0kb downstream 5.0kb downstream 5000 false scaffold00929: 143241-148240 Cucumis sativus
Cucsa.105510 10.0kb upstream 10.0kb upstream 21807 true scaffold00929: 148241-170047 Cucumis sativus
Cucsa.105510 10.0kb upstream 10.0kb upstream 10000 false scaffold00929: 160048-170047 Cucumis sativus
Cucsa.105510 10.0kb downstream 10.0kb downstream 21807 true scaffold00929: 138241-160047 Cucumis sativus
Cucsa.105510 10.0kb downstream 10.0kb downstream 10000 false scaffold00929: 138241-148240 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302399 5265 Fabidae View MSA
124066257 5270 Rosid View MSA
123746836 5271 Pentapetalae View MSA
122793818 5272 Eudicot View MSA
122042233 5273 Angiosperm View MSA
121346316 5274 Embryophyte View MSA
123424107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain