Protein Family : Pre-mRNA-processing-splicing factor 123424107

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  78

78 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29841.t000140 (1 of 1) K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) R. communis v0.1 11011   29841: 848978-859988
Cucsa.105510 (1 of 1) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 C. sativus v1.0 11807   scaffold00929: 148241-160047
orange1.1g042625m.g (1 of 1) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 C. sinensis v1.1 10517   scaffold00266: 60200-70716
AT1G80070 (1 of 2) K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) A. thaliana TAIR10 SUS2 9760   Chr1: 30118052-30127811
Thhalv10017992m.g (1 of 3) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 E. salsugineum v1.0 10463   scaffold_9: 131206-141668
Ciclev10024683m.g (1 of 1) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 C. clementina v1.0 11126   scaffold_7: 11536350-11547475
Lus10011489.g (1 of 2) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 L. usitatissimum v1.0 9720   scaffold1578: 381348-391067
Lus10023129.g (1 of 2) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 L. usitatissimum v1.0 9964   scaffold325: 554022-563985
Gorai.009G127700 (1 of 2) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 G. raimondii v2.1 11141   Chr09: 9618231-9629371
Gorai.011G084400 (1 of 2) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 G. raimondii v2.1 11532   Chr11: 8665579-8677110
estExt_Genewise1Plus.C_40685 (1 of 1) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 C. subellipsoidea C-169 v2.0 14274   scaffold_4: 2663398-2677671
estExt_fgenesh1_pg.C_100019 (1 of 1) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 M. pusilla CCMP1545 v3.0 7539   scaffold_10: 85223-92761
estExt_fgenesh2_pm.C_Chr_120006 (1 of 1) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 M. sp RCC299 v3.0 7450   Chr_12: 986056-993505
estExt_Genewise_ext.C_Chr_110029 (1 of 1) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 O. lucimarinus v2.0 7012   Chr_11: 52705-59716
Thecc1EG027212 (1 of 1) K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) T. cacao v1.1 16565   scaffold_6: 2301724-2318288
Migut.D01080 (1 of 1) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 M. guttatus v2.0 11093   scaffold_4: 5347925-5359017
Araha.2878s0002 (1 of 3) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 A. halleri v1.1 9561   Scaffold2878: 6403-15963
Cagra.1725s0130 (1 of 2) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 C. grandiflora v1.1 9856   Scaffold1725: 474448-484303
Glyma.13G366100 (1 of 2) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 G. max Wm82.a2.v1 11563   Chr13: 45198080-45209642
Glyma.15G007100 (1 of 2) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 G. max Wm82.a2.v1 11448   Chr15: 584884-596331
Brara.E00655 (1 of 3) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 B. rapa FPsc v1.3 6969   A05: 3738522-3745490
Bostr.20129s0508 (1 of 1) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 B. stricta v1.2 9967   Scaffold20129: 2689033-2698999
Cre01.g016050 (1 of 1) K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) C. reinhardtii v5.6 PRP8 16381   chromosome_1: 2694480-2710860
Medtr2g103960 (1 of 2) PF08082 - PRO8NT (NUC069), PrP8 N-terminal domain (PRO8NT) M. truncatula Mt4.0v1 12633   chr2: 44774641-44787273
SapurV1A.2728s0010 (1 of 2) K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) S. purpurea v1.0 11460   Scaffold2728: 41-11500
evm_27.TU.AmTr_v1.0_scaffold00046.46 (1 of 1) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 A. trichopoda v1.0 18378   AmTr_v1.0_scaffold00046: 1043392-1061769
Traes_5DL_1F83C9D99 (1 of 3) PF01398//PF08082//PF08083//PF08084//PF10596//PF10597//PF10598//PF12134 - JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB) // PRO8NT (NUC069), PrP8 N-terminal domain (PRO8NT) // PROCN (NUC071) domain (PROCN) // PROCT (NUC072) domain (PROCT) // U6-snRNA interacting domain of PrP8 (U6-snRNA_bdg) // U5-snRNA binding site 2 of PrP8 (U5_2-snRNA_bdg) // RNA recognition motif of the spliceosomal PrP8 (RRM_4) // PRP8 domain IV core (PRP8_domainIV) T. aestivum v2.2 11192   ta_iwgsc_5dl_v1_4569578: 6881-18072
Eucgr.F03935 (1 of 2) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 E. grandis v2.0 11618   Chr06: 50174847-50186464
Prupe.3G088200 (1 of 3) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 P. persica v2.1 10325   Pp03: 6559800-6570124
GSMUA_Achr2G05230_001 (1 of 1) PF08084 - PROCT (NUC072) domain (PROCT) M. acuminata v1 12330   chr2: 10423656-10435985

78 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29841.m002876 R. communis v0.1 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Cucsa.105510.1 C. sativus v1.0 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
orange1.1g042625m C. sinensis v1.1 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
AT1G80070.1 A. thaliana TAIR10 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Thhalv10017992m E. salsugineum v1.0 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Ciclev10024683m C. clementina v1.0 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Lus10011489 L. usitatissimum v1.0 123424107 Pre-mRNA-processing-splicing factor 2 5275 Viridiplantae
Lus10023129 L. usitatissimum v1.0 123424107 Pre-mRNA-processing-splicing factor 2 5275 Viridiplantae
Gorai.009G127700.1 G. raimondii v2.1 123424107 Pre-mRNA-processing-splicing factor 2 5275 Viridiplantae
Gorai.011G084400.1 G. raimondii v2.1 123424107 Pre-mRNA-processing-splicing factor 2 5275 Viridiplantae
28085 C. subellipsoidea C-169 v2.0 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
210656 M. pusilla CCMP1545 v3.0 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
107163 M. sp RCC299 v3.0 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
50795 O. lucimarinus v2.0 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Thecc1EG027212t2 T. cacao v1.1 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Migut.D01080.1.p M. guttatus v2.0 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Araha.2878s0002.1.p A. halleri v1.1 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Cagra.1725s0130.1.p C. grandiflora v1.1 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Glyma.13G366100.1.p G. max Wm82.a2.v1 123424107 Pre-mRNA-processing-splicing factor 2 5275 Viridiplantae
Glyma.15G007100.1.p G. max Wm82.a2.v1 123424107 Pre-mRNA-processing-splicing factor 2 5275 Viridiplantae
Brara.E00655.1.p B. rapa FPsc v1.3 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Bostr.20129s0508.1.p B. stricta v1.2 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Cre01.g016050.t1.2 C. reinhardtii v5.6 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Medtr2g103960.1 M. truncatula Mt4.0v1 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
SapurV1A.2728s0010.1.p S. purpurea v1.0 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00046.46 A. trichopoda v1.0 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Traes_5DL_1F83C9D99.2 T. aestivum v2.2 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Eucgr.F03935.1.p E. grandis v2.0 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
Prupe.3G088200.1.p P. persica v2.1 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae
GSMUA_Achr2P05230_001 M. acuminata v1 123424107 Pre-mRNA-processing-splicing factor 1 5275 Viridiplantae