Gene : Thecc1EG027212 T. cacao v1.1
Defline:  (1 of 1) K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) Genomic Order:  253
Name:  ? Thecc1EG027212 Secondary Identifier:  ? PAC:27441150
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG027212 0.5kb upstream 0.5kb upstream 17065 true scaffold_6: 2301724-2318788 Theobroma cacao
Thecc1EG027212 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 2318289-2318788 Theobroma cacao
Thecc1EG027212 0.5kb downstream 0.5kb downstream 17065 true scaffold_6: 2301224-2318288 Theobroma cacao
Thecc1EG027212 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 2301224-2301723 Theobroma cacao
Thecc1EG027212 1.0kb upstream 1.0kb upstream 17565 true scaffold_6: 2301724-2319288 Theobroma cacao
Thecc1EG027212 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 2318289-2319288 Theobroma cacao
Thecc1EG027212 1.0kb downstream 1.0kb downstream 17565 true scaffold_6: 2300724-2318288 Theobroma cacao
Thecc1EG027212 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 2300724-2301723 Theobroma cacao
Thecc1EG027212 2.0kb upstream 2.0kb upstream 18565 true scaffold_6: 2301724-2320288 Theobroma cacao
Thecc1EG027212 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 2318289-2320288 Theobroma cacao
Thecc1EG027212 2.0kb downstream 2.0kb downstream 18565 true scaffold_6: 2299724-2318288 Theobroma cacao
Thecc1EG027212 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 2299724-2301723 Theobroma cacao
Thecc1EG027212 5.0kb upstream 5.0kb upstream 21565 true scaffold_6: 2301724-2323288 Theobroma cacao
Thecc1EG027212 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 2318289-2323288 Theobroma cacao
Thecc1EG027212 5.0kb downstream 5.0kb downstream 21565 true scaffold_6: 2296724-2318288 Theobroma cacao
Thecc1EG027212 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 2296724-2301723 Theobroma cacao
Thecc1EG027212 10.0kb upstream 10.0kb upstream 26565 true scaffold_6: 2301724-2328288 Theobroma cacao
Thecc1EG027212 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 2318289-2328288 Theobroma cacao
Thecc1EG027212 10.0kb downstream 10.0kb downstream 26565 true scaffold_6: 2291724-2318288 Theobroma cacao
Thecc1EG027212 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 2291724-2301723 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836523 5264 Brassicales-Malvales View MSA
124342408 5266 SBM View MSA
124251367 5268 Malvidae View MSA
124066257 5270 Rosid View MSA
123746836 5271 Pentapetalae View MSA
122793818 5272 Eudicot View MSA
122042233 5273 Angiosperm View MSA
121346316 5274 Embryophyte View MSA
123424107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain