Gene : Eucgr.F03935 E. grandis v2.0
Defline:  (1 of 2) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 Genomic Order:  3496
Name:  ? Eucgr.F03935 Secondary Identifier:  ? PAC:32054892
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F03935 0.5kb upstream 0.5kb upstream 12118 true Chr06: 50174347-50186464 Eucalyptus grandis
Eucgr.F03935 0.5kb upstream 0.5kb upstream 500 false Chr06: 50174347-50174846 Eucalyptus grandis
Eucgr.F03935 0.5kb downstream 0.5kb downstream 12118 true Chr06: 50174847-50186964 Eucalyptus grandis
Eucgr.F03935 0.5kb downstream 0.5kb downstream 500 false Chr06: 50186465-50186964 Eucalyptus grandis
Eucgr.F03935 1.0kb upstream 1.0kb upstream 12618 true Chr06: 50173847-50186464 Eucalyptus grandis
Eucgr.F03935 1.0kb upstream 1.0kb upstream 1000 false Chr06: 50173847-50174846 Eucalyptus grandis
Eucgr.F03935 1.0kb downstream 1.0kb downstream 12618 true Chr06: 50174847-50187464 Eucalyptus grandis
Eucgr.F03935 1.0kb downstream 1.0kb downstream 1000 false Chr06: 50186465-50187464 Eucalyptus grandis
Eucgr.F03935 2.0kb upstream 2.0kb upstream 13618 true Chr06: 50172847-50186464 Eucalyptus grandis
Eucgr.F03935 2.0kb upstream 2.0kb upstream 2000 false Chr06: 50172847-50174846 Eucalyptus grandis
Eucgr.F03935 2.0kb downstream 2.0kb downstream 13618 true Chr06: 50174847-50188464 Eucalyptus grandis
Eucgr.F03935 2.0kb downstream 2.0kb downstream 2000 false Chr06: 50186465-50188464 Eucalyptus grandis
Eucgr.F03935 5.0kb upstream 5.0kb upstream 16618 true Chr06: 50169847-50186464 Eucalyptus grandis
Eucgr.F03935 5.0kb upstream 5.0kb upstream 5000 false Chr06: 50169847-50174846 Eucalyptus grandis
Eucgr.F03935 5.0kb downstream 5.0kb downstream 16618 true Chr06: 50174847-50191464 Eucalyptus grandis
Eucgr.F03935 5.0kb downstream 5.0kb downstream 5000 false Chr06: 50186465-50191464 Eucalyptus grandis
Eucgr.F03935 10.0kb upstream 10.0kb upstream 21618 true Chr06: 50164847-50186464 Eucalyptus grandis
Eucgr.F03935 10.0kb upstream 10.0kb upstream 10000 false Chr06: 50164847-50174846 Eucalyptus grandis
Eucgr.F03935 10.0kb downstream 10.0kb downstream 21618 true Chr06: 50174847-50196464 Eucalyptus grandis
Eucgr.F03935 10.0kb downstream 10.0kb downstream 10000 false Chr06: 50186465-50196464 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066257 5270 Rosid View MSA
123746836 5271 Pentapetalae View MSA
122793818 5272 Eudicot View MSA
122042233 5273 Angiosperm View MSA
121346316 5274 Embryophyte View MSA
123424107 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.231084 0.0 0.663112 Low  
cufflinks 0.0255205 0.0 0.095882 Low Low
cufflinks 0.336084 0.0 0.923537 Low  
cufflinks 0.0626167 0.0 0.208098 Low  
cufflinks 0.0698331 0.0 0.229895 Low  
cufflinks 0.419951 0.0 1.13889 Low High

0 Strain