Gene : Traes_5DL_1F83C9D99 T. aestivum v2.2
Defline:  (1 of 3) PF01398//PF08082//PF08083//PF08084//PF10596//PF10597//PF10598//PF12134 - JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB) // PRO8NT (NUC069), PrP8 N-terminal domain (PRO8NT) // PROCN (NUC071) domain (PROCN) // PROCT (NUC072) domain (PROCT) // U6-snRNA interacting domain of PrP8 (U6-snRNA_bdg) // U5-snRNA binding site 2 of PrP8 (U5_2-snRNA_bdg) // RNA recognition motif of the spliceosomal PrP8 (RRM_4) // PRP8 domain IV core (PRP8_domainIV) Genomic Order:  1
Name:  ? Traes_5DL_1F83C9D99 Secondary Identifier:  ? PAC:32015126
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5DL_1F83C9D99 0.5kb upstream 0.5kb upstream 11692 true ta_iwgsc_5dl_v1_4569578: 6881-18572 Triticum aestivum
Traes_5DL_1F83C9D99 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5dl_v1_4569578: 18073-18572 Triticum aestivum
Traes_5DL_1F83C9D99 0.5kb downstream 0.5kb downstream 11692 true ta_iwgsc_5dl_v1_4569578: 6381-18072 Triticum aestivum
Traes_5DL_1F83C9D99 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5dl_v1_4569578: 6381-6880 Triticum aestivum
Traes_5DL_1F83C9D99 1.0kb upstream 1.0kb upstream 12192 true ta_iwgsc_5dl_v1_4569578: 6881-19072 Triticum aestivum
Traes_5DL_1F83C9D99 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5dl_v1_4569578: 18073-19072 Triticum aestivum
Traes_5DL_1F83C9D99 1.0kb downstream 1.0kb downstream 12192 true ta_iwgsc_5dl_v1_4569578: 5881-18072 Triticum aestivum
Traes_5DL_1F83C9D99 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5dl_v1_4569578: 5881-6880 Triticum aestivum
Traes_5DL_1F83C9D99 2.0kb upstream 2.0kb upstream 13192 true ta_iwgsc_5dl_v1_4569578: 6881-20072 Triticum aestivum
Traes_5DL_1F83C9D99 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_5dl_v1_4569578: 18073-20072 Triticum aestivum
Traes_5DL_1F83C9D99 2.0kb downstream 2.0kb downstream 13192 true ta_iwgsc_5dl_v1_4569578: 4881-18072 Triticum aestivum
Traes_5DL_1F83C9D99 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5dl_v1_4569578: 4881-6880 Triticum aestivum
Traes_5DL_1F83C9D99 5.0kb upstream 5.0kb upstream 16192 true ta_iwgsc_5dl_v1_4569578: 6881-23072 Triticum aestivum
Traes_5DL_1F83C9D99 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_5dl_v1_4569578: 18073-23072 Triticum aestivum
Traes_5DL_1F83C9D99 5.0kb downstream 5.0kb downstream 16192 true ta_iwgsc_5dl_v1_4569578: 1881-18072 Triticum aestivum
Traes_5DL_1F83C9D99 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_5dl_v1_4569578: 1881-6880 Triticum aestivum
Traes_5DL_1F83C9D99 10.0kb upstream 10.0kb upstream 16375 true ta_iwgsc_5dl_v1_4569578: 6881-23255 Triticum aestivum
Traes_5DL_1F83C9D99 10.0kb upstream 10.0kb upstream 5183 false ta_iwgsc_5dl_v1_4569578: 18073-23255 Triticum aestivum
Traes_5DL_1F83C9D99 10.0kb downstream 10.0kb downstream 18072 true ta_iwgsc_5dl_v1_4569578: 1-18072 Triticum aestivum
Traes_5DL_1F83C9D99 10.0kb downstream 10.0kb downstream 6880 false ta_iwgsc_5dl_v1_4569578: 1-6880 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570659 5269 Grass View MSA
122042233 5273 Angiosperm View MSA
121346316 5274 Embryophyte View MSA
123424107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain