Gene : evm_27.TU.AmTr_v1.0_scaffold00046.46 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11140 - PRE-MRNA SPLICING FACTOR PRP8 Genomic Order:  46
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00046.46 Secondary Identifier:  ? PAC:31553426
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00046.46 0.5kb upstream 0.5kb upstream 18878 true AmTr_v1.0_scaffold00046: 1043392-1062269 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00046: 1061770-1062269 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 0.5kb downstream 0.5kb downstream 18878 true AmTr_v1.0_scaffold00046: 1042892-1061769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00046: 1042892-1043391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 1.0kb upstream 1.0kb upstream 19378 true AmTr_v1.0_scaffold00046: 1043392-1062769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00046: 1061770-1062769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 1.0kb downstream 1.0kb downstream 19378 true AmTr_v1.0_scaffold00046: 1042392-1061769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00046: 1042392-1043391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 2.0kb upstream 2.0kb upstream 20378 true AmTr_v1.0_scaffold00046: 1043392-1063769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00046: 1061770-1063769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 2.0kb downstream 2.0kb downstream 20378 true AmTr_v1.0_scaffold00046: 1041392-1061769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00046: 1041392-1043391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 5.0kb upstream 5.0kb upstream 23378 true AmTr_v1.0_scaffold00046: 1043392-1066769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00046: 1061770-1066769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 5.0kb downstream 5.0kb downstream 23378 true AmTr_v1.0_scaffold00046: 1038392-1061769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00046: 1038392-1043391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 10.0kb upstream 10.0kb upstream 28378 true AmTr_v1.0_scaffold00046: 1043392-1071769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00046: 1061770-1071769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 10.0kb downstream 10.0kb downstream 28378 true AmTr_v1.0_scaffold00046: 1033392-1061769 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00046.46 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00046: 1033392-1043391 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042233 5273 Angiosperm View MSA
121346316 5274 Embryophyte View MSA
123424107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain