Gene : Cucsa.123990 C. sativus v1.0
Defline:  (1 of 1) PTHR10338:SF126 - MAGNESIUM-CHELATASE SUBUNIT CHLD, CHLOROPLASTIC Genomic Order:  7
Name:  ? Cucsa.123990 Secondary Identifier:  ? PAC:16961641
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus CHLOROPHYLL-SYN Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.123990 0.5kb upstream 0.5kb upstream 7488 true scaffold01001: 54356-61843 Cucumis sativus
Cucsa.123990 0.5kb upstream 0.5kb upstream 500 false scaffold01001: 54356-54855 Cucumis sativus
Cucsa.123990 0.5kb downstream 0.5kb downstream 7488 true scaffold01001: 54856-62343 Cucumis sativus
Cucsa.123990 0.5kb downstream 0.5kb downstream 500 false scaffold01001: 61844-62343 Cucumis sativus
Cucsa.123990 1.0kb upstream 1.0kb upstream 7988 true scaffold01001: 53856-61843 Cucumis sativus
Cucsa.123990 1.0kb upstream 1.0kb upstream 1000 false scaffold01001: 53856-54855 Cucumis sativus
Cucsa.123990 1.0kb downstream 1.0kb downstream 7988 true scaffold01001: 54856-62843 Cucumis sativus
Cucsa.123990 1.0kb downstream 1.0kb downstream 1000 false scaffold01001: 61844-62843 Cucumis sativus
Cucsa.123990 2.0kb upstream 2.0kb upstream 8988 true scaffold01001: 52856-61843 Cucumis sativus
Cucsa.123990 2.0kb upstream 2.0kb upstream 2000 false scaffold01001: 52856-54855 Cucumis sativus
Cucsa.123990 2.0kb downstream 2.0kb downstream 8988 true scaffold01001: 54856-63843 Cucumis sativus
Cucsa.123990 2.0kb downstream 2.0kb downstream 2000 false scaffold01001: 61844-63843 Cucumis sativus
Cucsa.123990 5.0kb upstream 5.0kb upstream 11988 true scaffold01001: 49856-61843 Cucumis sativus
Cucsa.123990 5.0kb upstream 5.0kb upstream 5000 false scaffold01001: 49856-54855 Cucumis sativus
Cucsa.123990 5.0kb downstream 5.0kb downstream 11988 true scaffold01001: 54856-66843 Cucumis sativus
Cucsa.123990 5.0kb downstream 5.0kb downstream 5000 false scaffold01001: 61844-66843 Cucumis sativus
Cucsa.123990 10.0kb upstream 10.0kb upstream 16988 true scaffold01001: 44856-61843 Cucumis sativus
Cucsa.123990 10.0kb upstream 10.0kb upstream 10000 false scaffold01001: 44856-54855 Cucumis sativus
Cucsa.123990 10.0kb downstream 10.0kb downstream 16988 true scaffold01001: 54856-71843 Cucumis sativus
Cucsa.123990 10.0kb downstream 10.0kb downstream 10000 false scaffold01001: 61844-71843 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026552 5273 Angiosperm View MSA
122304637 5265 Fabidae View MSA
124050211 5270 Rosid View MSA
123740767 5271 Pentapetalae View MSA
122793676 5272 Eudicot View MSA
121344824 5274 Embryophyte View MSA
123424530 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain