Gene : Cucsa.117790 C. sativus v1.0
Defline:  (1 of 3) PTHR21717:SF9 - PROTEIN TBF1 Genomic Order:  15
Name:  ? Cucsa.117790 Secondary Identifier:  ? PAC:16960771
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.117790 0.5kb upstream 0.5kb upstream 5977 true scaffold00997: 126223-132199 Cucumis sativus
Cucsa.117790 0.5kb upstream 0.5kb upstream 500 false scaffold00997: 131700-132199 Cucumis sativus
Cucsa.117790 0.5kb downstream 0.5kb downstream 5977 true scaffold00997: 125723-131699 Cucumis sativus
Cucsa.117790 0.5kb downstream 0.5kb downstream 500 false scaffold00997: 125723-126222 Cucumis sativus
Cucsa.117790 1.0kb upstream 1.0kb upstream 6477 true scaffold00997: 126223-132699 Cucumis sativus
Cucsa.117790 1.0kb upstream 1.0kb upstream 1000 false scaffold00997: 131700-132699 Cucumis sativus
Cucsa.117790 1.0kb downstream 1.0kb downstream 6477 true scaffold00997: 125223-131699 Cucumis sativus
Cucsa.117790 1.0kb downstream 1.0kb downstream 1000 false scaffold00997: 125223-126222 Cucumis sativus
Cucsa.117790 2.0kb upstream 2.0kb upstream 7477 true scaffold00997: 126223-133699 Cucumis sativus
Cucsa.117790 2.0kb upstream 2.0kb upstream 2000 false scaffold00997: 131700-133699 Cucumis sativus
Cucsa.117790 2.0kb downstream 2.0kb downstream 7477 true scaffold00997: 124223-131699 Cucumis sativus
Cucsa.117790 2.0kb downstream 2.0kb downstream 2000 false scaffold00997: 124223-126222 Cucumis sativus
Cucsa.117790 5.0kb upstream 5.0kb upstream 10477 true scaffold00997: 126223-136699 Cucumis sativus
Cucsa.117790 5.0kb upstream 5.0kb upstream 5000 false scaffold00997: 131700-136699 Cucumis sativus
Cucsa.117790 5.0kb downstream 5.0kb downstream 10477 true scaffold00997: 121223-131699 Cucumis sativus
Cucsa.117790 5.0kb downstream 5.0kb downstream 5000 false scaffold00997: 121223-126222 Cucumis sativus
Cucsa.117790 10.0kb upstream 10.0kb upstream 15477 true scaffold00997: 126223-141699 Cucumis sativus
Cucsa.117790 10.0kb upstream 10.0kb upstream 10000 false scaffold00997: 131700-141699 Cucumis sativus
Cucsa.117790 10.0kb downstream 10.0kb downstream 15477 true scaffold00997: 116223-131699 Cucumis sativus
Cucsa.117790 10.0kb downstream 10.0kb downstream 10000 false scaffold00997: 116223-126222 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308897 5265 Fabidae View MSA
124063345 5270 Rosid View MSA
123753061 5271 Pentapetalae View MSA
122788041 5272 Eudicot View MSA
122049318 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348439 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain