Gene : Cucsa.116430 C. sativus v1.0
Defline:  (1 of 2) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG Genomic Order:  34
Name:  ? Cucsa.116430 Secondary Identifier:  ? PAC:16960562
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.116430 0.5kb upstream 0.5kb upstream 5033 true scaffold00995: 334576-339608 Cucumis sativus
Cucsa.116430 0.5kb upstream 0.5kb upstream 500 false scaffold00995: 339109-339608 Cucumis sativus
Cucsa.116430 0.5kb downstream 0.5kb downstream 5033 true scaffold00995: 334076-339108 Cucumis sativus
Cucsa.116430 0.5kb downstream 0.5kb downstream 500 false scaffold00995: 334076-334575 Cucumis sativus
Cucsa.116430 1.0kb upstream 1.0kb upstream 5533 true scaffold00995: 334576-340108 Cucumis sativus
Cucsa.116430 1.0kb upstream 1.0kb upstream 1000 false scaffold00995: 339109-340108 Cucumis sativus
Cucsa.116430 1.0kb downstream 1.0kb downstream 5533 true scaffold00995: 333576-339108 Cucumis sativus
Cucsa.116430 1.0kb downstream 1.0kb downstream 1000 false scaffold00995: 333576-334575 Cucumis sativus
Cucsa.116430 2.0kb upstream 2.0kb upstream 6533 true scaffold00995: 334576-341108 Cucumis sativus
Cucsa.116430 2.0kb upstream 2.0kb upstream 2000 false scaffold00995: 339109-341108 Cucumis sativus
Cucsa.116430 2.0kb downstream 2.0kb downstream 6533 true scaffold00995: 332576-339108 Cucumis sativus
Cucsa.116430 2.0kb downstream 2.0kb downstream 2000 false scaffold00995: 332576-334575 Cucumis sativus
Cucsa.116430 5.0kb upstream 5.0kb upstream 9533 true scaffold00995: 334576-344108 Cucumis sativus
Cucsa.116430 5.0kb upstream 5.0kb upstream 5000 false scaffold00995: 339109-344108 Cucumis sativus
Cucsa.116430 5.0kb downstream 5.0kb downstream 9533 true scaffold00995: 329576-339108 Cucumis sativus
Cucsa.116430 5.0kb downstream 5.0kb downstream 5000 false scaffold00995: 329576-334575 Cucumis sativus
Cucsa.116430 10.0kb upstream 10.0kb upstream 14533 true scaffold00995: 334576-349108 Cucumis sativus
Cucsa.116430 10.0kb upstream 10.0kb upstream 10000 false scaffold00995: 339109-349108 Cucumis sativus
Cucsa.116430 10.0kb downstream 10.0kb downstream 14533 true scaffold00995: 324576-339108 Cucumis sativus
Cucsa.116430 10.0kb downstream 10.0kb downstream 10000 false scaffold00995: 324576-334575 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307054 5265 Fabidae View MSA
124069206 5270 Rosid View MSA
123746618 5271 Pentapetalae View MSA
122795390 5272 Eudicot View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain