Gene : Cucsa.116390 C. sativus v1.0
Defline:  (1 of 2) PTHR34282:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MSD24 Genomic Order:  30
Name:  ? Cucsa.116390 Secondary Identifier:  ? PAC:16960557
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.116390 0.5kb upstream 0.5kb upstream 3935 true scaffold00995: 303138-307072 Cucumis sativus
Cucsa.116390 0.5kb upstream 0.5kb upstream 500 false scaffold00995: 306573-307072 Cucumis sativus
Cucsa.116390 0.5kb downstream 0.5kb downstream 3935 true scaffold00995: 302638-306572 Cucumis sativus
Cucsa.116390 0.5kb downstream 0.5kb downstream 500 false scaffold00995: 302638-303137 Cucumis sativus
Cucsa.116390 1.0kb upstream 1.0kb upstream 4435 true scaffold00995: 303138-307572 Cucumis sativus
Cucsa.116390 1.0kb upstream 1.0kb upstream 1000 false scaffold00995: 306573-307572 Cucumis sativus
Cucsa.116390 1.0kb downstream 1.0kb downstream 4435 true scaffold00995: 302138-306572 Cucumis sativus
Cucsa.116390 1.0kb downstream 1.0kb downstream 1000 false scaffold00995: 302138-303137 Cucumis sativus
Cucsa.116390 2.0kb upstream 2.0kb upstream 5435 true scaffold00995: 303138-308572 Cucumis sativus
Cucsa.116390 2.0kb upstream 2.0kb upstream 2000 false scaffold00995: 306573-308572 Cucumis sativus
Cucsa.116390 2.0kb downstream 2.0kb downstream 5435 true scaffold00995: 301138-306572 Cucumis sativus
Cucsa.116390 2.0kb downstream 2.0kb downstream 2000 false scaffold00995: 301138-303137 Cucumis sativus
Cucsa.116390 5.0kb upstream 5.0kb upstream 8435 true scaffold00995: 303138-311572 Cucumis sativus
Cucsa.116390 5.0kb upstream 5.0kb upstream 5000 false scaffold00995: 306573-311572 Cucumis sativus
Cucsa.116390 5.0kb downstream 5.0kb downstream 8435 true scaffold00995: 298138-306572 Cucumis sativus
Cucsa.116390 5.0kb downstream 5.0kb downstream 5000 false scaffold00995: 298138-303137 Cucumis sativus
Cucsa.116390 10.0kb upstream 10.0kb upstream 13435 true scaffold00995: 303138-316572 Cucumis sativus
Cucsa.116390 10.0kb upstream 10.0kb upstream 10000 false scaffold00995: 306573-316572 Cucumis sativus
Cucsa.116390 10.0kb downstream 10.0kb downstream 13435 true scaffold00995: 293138-306572 Cucumis sativus
Cucsa.116390 10.0kb downstream 10.0kb downstream 10000 false scaffold00995: 293138-303137 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307577 5265 Fabidae View MSA
124062451 5270 Rosid View MSA
123742070 5271 Pentapetalae View MSA
122794561 5272 Eudicot View MSA
122048518 5273 Angiosperm View MSA
121311000 5274 Embryophyte View MSA
123348358 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain