Gene : Cucsa.119220 C. sativus v1.0
Defline:  (1 of 1) PTHR15111 - RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3 Genomic Order:  105
Name:  ? Cucsa.119220 Secondary Identifier:  ? PAC:16960944
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.119220 0.5kb upstream 0.5kb upstream 4958 true scaffold00998: 1109093-1114050 Cucumis sativus
Cucsa.119220 0.5kb upstream 0.5kb upstream 500 false scaffold00998: 1113551-1114050 Cucumis sativus
Cucsa.119220 0.5kb downstream 0.5kb downstream 4958 true scaffold00998: 1108593-1113550 Cucumis sativus
Cucsa.119220 0.5kb downstream 0.5kb downstream 500 false scaffold00998: 1108593-1109092 Cucumis sativus
Cucsa.119220 1.0kb upstream 1.0kb upstream 5458 true scaffold00998: 1109093-1114550 Cucumis sativus
Cucsa.119220 1.0kb upstream 1.0kb upstream 1000 false scaffold00998: 1113551-1114550 Cucumis sativus
Cucsa.119220 1.0kb downstream 1.0kb downstream 5458 true scaffold00998: 1108093-1113550 Cucumis sativus
Cucsa.119220 1.0kb downstream 1.0kb downstream 1000 false scaffold00998: 1108093-1109092 Cucumis sativus
Cucsa.119220 2.0kb upstream 2.0kb upstream 6458 true scaffold00998: 1109093-1115550 Cucumis sativus
Cucsa.119220 2.0kb upstream 2.0kb upstream 2000 false scaffold00998: 1113551-1115550 Cucumis sativus
Cucsa.119220 2.0kb downstream 2.0kb downstream 6458 true scaffold00998: 1107093-1113550 Cucumis sativus
Cucsa.119220 2.0kb downstream 2.0kb downstream 2000 false scaffold00998: 1107093-1109092 Cucumis sativus
Cucsa.119220 5.0kb upstream 5.0kb upstream 9458 true scaffold00998: 1109093-1118550 Cucumis sativus
Cucsa.119220 5.0kb upstream 5.0kb upstream 5000 false scaffold00998: 1113551-1118550 Cucumis sativus
Cucsa.119220 5.0kb downstream 5.0kb downstream 9458 true scaffold00998: 1104093-1113550 Cucumis sativus
Cucsa.119220 5.0kb downstream 5.0kb downstream 5000 false scaffold00998: 1104093-1109092 Cucumis sativus
Cucsa.119220 10.0kb upstream 10.0kb upstream 14458 true scaffold00998: 1109093-1123550 Cucumis sativus
Cucsa.119220 10.0kb upstream 10.0kb upstream 10000 false scaffold00998: 1113551-1123550 Cucumis sativus
Cucsa.119220 10.0kb downstream 10.0kb downstream 14458 true scaffold00998: 1099093-1113550 Cucumis sativus
Cucsa.119220 10.0kb downstream 10.0kb downstream 10000 false scaffold00998: 1099093-1109092 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041391 5273 Angiosperm View MSA
122302090 5265 Fabidae View MSA
124060568 5270 Rosid View MSA
123741062 5271 Pentapetalae View MSA
122788086 5272 Eudicot View MSA
121345968 5274 Embryophyte View MSA
123425658 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain