Gene : Cucsa.118520 C. sativus v1.0
Defline:  (1 of 1) PTHR11406:SF8 - PHOSPHOGLYCERATE KINASE 1, CHLOROPLASTIC-RELATED Genomic Order:  36
Name:  ? Cucsa.118520 Secondary Identifier:  ? PAC:16960840
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus ANAEROFRUCAT-PWY Cucumis sativus pathologic  
Csativus ANAGLYCOLYSIS-PWY Cucumis sativus pathologic  
Csativus CALVIN-PWY Cucumis sativus pathologic  
Csativus GLUCONEO-PWY Cucumis sativus pathologic  
Csativus PHOTOALL-PWY Cucumis sativus pathologic  
Csativus PWY-1042 Cucumis sativus pathologic  
Csativus PWY-5464 Cucumis sativus pathologic  
Csativus SUCSYN-PWY Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.118520 0.5kb upstream 0.5kb upstream 3700 true scaffold00998: 429158-432857 Cucumis sativus
Cucsa.118520 0.5kb upstream 0.5kb upstream 500 false scaffold00998: 429158-429657 Cucumis sativus
Cucsa.118520 0.5kb downstream 0.5kb downstream 3700 true scaffold00998: 429658-433357 Cucumis sativus
Cucsa.118520 0.5kb downstream 0.5kb downstream 500 false scaffold00998: 432858-433357 Cucumis sativus
Cucsa.118520 1.0kb upstream 1.0kb upstream 4200 true scaffold00998: 428658-432857 Cucumis sativus
Cucsa.118520 1.0kb upstream 1.0kb upstream 1000 false scaffold00998: 428658-429657 Cucumis sativus
Cucsa.118520 1.0kb downstream 1.0kb downstream 4200 true scaffold00998: 429658-433857 Cucumis sativus
Cucsa.118520 1.0kb downstream 1.0kb downstream 1000 false scaffold00998: 432858-433857 Cucumis sativus
Cucsa.118520 2.0kb upstream 2.0kb upstream 5200 true scaffold00998: 427658-432857 Cucumis sativus
Cucsa.118520 2.0kb upstream 2.0kb upstream 2000 false scaffold00998: 427658-429657 Cucumis sativus
Cucsa.118520 2.0kb downstream 2.0kb downstream 5200 true scaffold00998: 429658-434857 Cucumis sativus
Cucsa.118520 2.0kb downstream 2.0kb downstream 2000 false scaffold00998: 432858-434857 Cucumis sativus
Cucsa.118520 5.0kb upstream 5.0kb upstream 8200 true scaffold00998: 424658-432857 Cucumis sativus
Cucsa.118520 5.0kb upstream 5.0kb upstream 5000 false scaffold00998: 424658-429657 Cucumis sativus
Cucsa.118520 5.0kb downstream 5.0kb downstream 8200 true scaffold00998: 429658-437857 Cucumis sativus
Cucsa.118520 5.0kb downstream 5.0kb downstream 5000 false scaffold00998: 432858-437857 Cucumis sativus
Cucsa.118520 10.0kb upstream 10.0kb upstream 13200 true scaffold00998: 419658-432857 Cucumis sativus
Cucsa.118520 10.0kb upstream 10.0kb upstream 10000 false scaffold00998: 419658-429657 Cucumis sativus
Cucsa.118520 10.0kb downstream 10.0kb downstream 13200 true scaffold00998: 429658-442857 Cucumis sativus
Cucsa.118520 10.0kb downstream 10.0kb downstream 10000 false scaffold00998: 432858-442857 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308009 5265 Fabidae View MSA
124066937 5270 Rosid View MSA
123738509 5271 Pentapetalae View MSA
122793227 5272 Eudicot View MSA
122042825 5273 Angiosperm View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain