Gene : Cucsa.141850 C. sativus v1.0
Defline:  (1 of 1) 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase Genomic Order:  32
Name:  ? Cucsa.141850 Secondary Identifier:  ? PAC:16963538
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-4361 Cucumis sativus pathologic  
Csativus PWY-7270 Cucumis sativus pathologic  
Csativus PWY-7528 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.141850 0.5kb upstream 0.5kb upstream 4012 true scaffold01079: 211884-215895 Cucumis sativus
Cucsa.141850 0.5kb upstream 0.5kb upstream 500 false scaffold01079: 215396-215895 Cucumis sativus
Cucsa.141850 0.5kb downstream 0.5kb downstream 4012 true scaffold01079: 211384-215395 Cucumis sativus
Cucsa.141850 0.5kb downstream 0.5kb downstream 500 false scaffold01079: 211384-211883 Cucumis sativus
Cucsa.141850 1.0kb upstream 1.0kb upstream 4512 true scaffold01079: 211884-216395 Cucumis sativus
Cucsa.141850 1.0kb upstream 1.0kb upstream 1000 false scaffold01079: 215396-216395 Cucumis sativus
Cucsa.141850 1.0kb downstream 1.0kb downstream 4512 true scaffold01079: 210884-215395 Cucumis sativus
Cucsa.141850 1.0kb downstream 1.0kb downstream 1000 false scaffold01079: 210884-211883 Cucumis sativus
Cucsa.141850 2.0kb upstream 2.0kb upstream 5512 true scaffold01079: 211884-217395 Cucumis sativus
Cucsa.141850 2.0kb upstream 2.0kb upstream 2000 false scaffold01079: 215396-217395 Cucumis sativus
Cucsa.141850 2.0kb downstream 2.0kb downstream 5512 true scaffold01079: 209884-215395 Cucumis sativus
Cucsa.141850 2.0kb downstream 2.0kb downstream 2000 false scaffold01079: 209884-211883 Cucumis sativus
Cucsa.141850 5.0kb upstream 5.0kb upstream 8512 true scaffold01079: 211884-220395 Cucumis sativus
Cucsa.141850 5.0kb upstream 5.0kb upstream 5000 false scaffold01079: 215396-220395 Cucumis sativus
Cucsa.141850 5.0kb downstream 5.0kb downstream 8512 true scaffold01079: 206884-215395 Cucumis sativus
Cucsa.141850 5.0kb downstream 5.0kb downstream 5000 false scaffold01079: 206884-211883 Cucumis sativus
Cucsa.141850 10.0kb upstream 10.0kb upstream 13512 true scaffold01079: 211884-225395 Cucumis sativus
Cucsa.141850 10.0kb upstream 10.0kb upstream 10000 false scaffold01079: 215396-225395 Cucumis sativus
Cucsa.141850 10.0kb downstream 10.0kb downstream 13512 true scaffold01079: 201884-215395 Cucumis sativus
Cucsa.141850 10.0kb downstream 10.0kb downstream 10000 false scaffold01079: 201884-211883 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303152 5265 Fabidae View MSA
124060423 5270 Rosid View MSA
123740094 5271 Pentapetalae View MSA
122788864 5272 Eudicot View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain