Gene : Cucsa.140420 C. sativus v1.0
Defline:  (1 of 2) PF10536//PF10551 - Plant mobile domain (PMD) // MULE transposase domain (MULE) Genomic Order:  21
Name:  ? Cucsa.140420 Secondary Identifier:  ? PAC:16963453
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.140420 0.5kb upstream 0.5kb upstream 4814 true scaffold01071: 306366-311179 Cucumis sativus
Cucsa.140420 0.5kb upstream 0.5kb upstream 500 false scaffold01071: 306366-306865 Cucumis sativus
Cucsa.140420 0.5kb downstream 0.5kb downstream 4814 true scaffold01071: 306866-311679 Cucumis sativus
Cucsa.140420 0.5kb downstream 0.5kb downstream 500 false scaffold01071: 311180-311679 Cucumis sativus
Cucsa.140420 1.0kb upstream 1.0kb upstream 5314 true scaffold01071: 305866-311179 Cucumis sativus
Cucsa.140420 1.0kb upstream 1.0kb upstream 1000 false scaffold01071: 305866-306865 Cucumis sativus
Cucsa.140420 1.0kb downstream 1.0kb downstream 5314 true scaffold01071: 306866-312179 Cucumis sativus
Cucsa.140420 1.0kb downstream 1.0kb downstream 1000 false scaffold01071: 311180-312179 Cucumis sativus
Cucsa.140420 2.0kb upstream 2.0kb upstream 6314 true scaffold01071: 304866-311179 Cucumis sativus
Cucsa.140420 2.0kb upstream 2.0kb upstream 2000 false scaffold01071: 304866-306865 Cucumis sativus
Cucsa.140420 2.0kb downstream 2.0kb downstream 6314 true scaffold01071: 306866-313179 Cucumis sativus
Cucsa.140420 2.0kb downstream 2.0kb downstream 2000 false scaffold01071: 311180-313179 Cucumis sativus
Cucsa.140420 5.0kb upstream 5.0kb upstream 9314 true scaffold01071: 301866-311179 Cucumis sativus
Cucsa.140420 5.0kb upstream 5.0kb upstream 5000 false scaffold01071: 301866-306865 Cucumis sativus
Cucsa.140420 5.0kb downstream 5.0kb downstream 9314 true scaffold01071: 306866-316179 Cucumis sativus
Cucsa.140420 5.0kb downstream 5.0kb downstream 5000 false scaffold01071: 311180-316179 Cucumis sativus
Cucsa.140420 10.0kb upstream 10.0kb upstream 14314 true scaffold01071: 296866-311179 Cucumis sativus
Cucsa.140420 10.0kb upstream 10.0kb upstream 10000 false scaffold01071: 296866-306865 Cucumis sativus
Cucsa.140420 10.0kb downstream 10.0kb downstream 14314 true scaffold01071: 306866-321179 Cucumis sativus
Cucsa.140420 10.0kb downstream 10.0kb downstream 10000 false scaffold01071: 311180-321179 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121603238 5273 Angiosperm Singleton cluster - no MSA
122233485 5265 Fabidae Singleton cluster - no MSA
123979713 5270 Rosid Singleton cluster - no MSA
123555390 5271 Pentapetalae Singleton cluster - no MSA
122590204 5272 Eudicot Singleton cluster - no MSA
120875528 5274 Embryophyte Singleton cluster - no MSA
122916419 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain