Gene : Cucsa.127880 C. sativus v1.0
Defline:  (1 of 1) PTHR13301//PTHR13301:SF61 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  6
Name:  ? Cucsa.127880 Secondary Identifier:  ? PAC:16962088
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-1001 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.127880 0.5kb upstream 0.5kb upstream 6966 true scaffold01024: 33218-40183 Cucumis sativus
Cucsa.127880 0.5kb upstream 0.5kb upstream 500 false scaffold01024: 39684-40183 Cucumis sativus
Cucsa.127880 0.5kb downstream 0.5kb downstream 6966 true scaffold01024: 32718-39683 Cucumis sativus
Cucsa.127880 0.5kb downstream 0.5kb downstream 500 false scaffold01024: 32718-33217 Cucumis sativus
Cucsa.127880 1.0kb upstream 1.0kb upstream 7466 true scaffold01024: 33218-40683 Cucumis sativus
Cucsa.127880 1.0kb upstream 1.0kb upstream 1000 false scaffold01024: 39684-40683 Cucumis sativus
Cucsa.127880 1.0kb downstream 1.0kb downstream 7466 true scaffold01024: 32218-39683 Cucumis sativus
Cucsa.127880 1.0kb downstream 1.0kb downstream 1000 false scaffold01024: 32218-33217 Cucumis sativus
Cucsa.127880 2.0kb upstream 2.0kb upstream 8466 true scaffold01024: 33218-41683 Cucumis sativus
Cucsa.127880 2.0kb upstream 2.0kb upstream 2000 false scaffold01024: 39684-41683 Cucumis sativus
Cucsa.127880 2.0kb downstream 2.0kb downstream 8466 true scaffold01024: 31218-39683 Cucumis sativus
Cucsa.127880 2.0kb downstream 2.0kb downstream 2000 false scaffold01024: 31218-33217 Cucumis sativus
Cucsa.127880 5.0kb upstream 5.0kb upstream 11466 true scaffold01024: 33218-44683 Cucumis sativus
Cucsa.127880 5.0kb upstream 5.0kb upstream 5000 false scaffold01024: 39684-44683 Cucumis sativus
Cucsa.127880 5.0kb downstream 5.0kb downstream 11466 true scaffold01024: 28218-39683 Cucumis sativus
Cucsa.127880 5.0kb downstream 5.0kb downstream 5000 false scaffold01024: 28218-33217 Cucumis sativus
Cucsa.127880 10.0kb upstream 10.0kb upstream 16466 true scaffold01024: 33218-49683 Cucumis sativus
Cucsa.127880 10.0kb upstream 10.0kb upstream 10000 false scaffold01024: 39684-49683 Cucumis sativus
Cucsa.127880 10.0kb downstream 10.0kb downstream 16466 true scaffold01024: 23218-39683 Cucumis sativus
Cucsa.127880 10.0kb downstream 10.0kb downstream 10000 false scaffold01024: 23218-33217 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314851 5265 Fabidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain